Gene Information

Name : Memar_0207 (Memar_0207)
Accession : YP_001046123.1
Strain : Methanoculleus marisnigri JR1
Genome accession: NC_009051
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 190141 - 191406 bp
Length : 1266 bp
Strand : -
Note : PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; UDP-glucose/GDP-mannose dehydrogenase; KEGG: mtp:Mthe_1081 UDP-glucose 6-dehydrogenase

DNA sequence : 
ATGCGGATAACAGTCGTCGGCGGGGGGTACGTCGGCCTGGTCACGGGGGCCTGCTTTGCCGAACTCGGGCACACCGTCGA
TATTGTCGAGATCGATGCGAGGAAGGCGGCGGCGATCAACGCCGGGCGCGCCCCGATCCACGAGCGGGGGCTCGATATGC
TCCTTGAGCGGCACGCAGGCGAGCGGCTCAGCGCGGGGACGGACTACGGTCCGGTGGCGGAGGCGGACCTCTCGTTTGTC
TGCGTCGGCACCCCGCCGGCGGCCGACGGGAGCGCCGACCTCTCGATGGTCGCCGCGGCGAGCCGGTCGATCGGGGAGGC
GCTCCGCGACGGGAATGGTTTGCACACCGTCGTTGTGAAGAGCACCGTGCCGCCGGGGACGACCGCGGGCCTCGTCGTGC
CCGCGATCCTCGAACACTCCGGCCGGAACGAGATCGGGTTTGCGATGAACCCGGAGTTCCTCCGGGAGGGGCGTGCGGTG
GAGGACTTCCTGCACCCGGACCGGATCGTGATCGGGAGCCGGGATGACCGTTCCGGCGAGGCCGTCGCCGCGGTCTACCG
CGGGCTTTCTGCCCCGGTGGTGCGGTGCGGCCTCACCGCCGCGGAGATGATCAAGTACGCCTCGAACGCCCTCCTCGCGA
CGAAGATCTCGTTTTCAAACGAGGTGGGAAACGTCTGCAAGCGCCTCGGAATCGACGTCTACGAGGTGATGGAGGGCGTC
GGGATGGATCACCGGGTCTCGCCGCACTTTCTATCCGCCGGCGCCGGGTTCGGGGGGAGCTGCTTCCCAAAAGACGTCGC
GGCCCTTGTCAGCCTCGCGGAGTCGCTCGGCGAAGAGCCCGCACTCCTCCGGTCGGTCCTCGACGTCAACGACCGCCAGC
CGCTCCGTCTGGTGGGGCTCCTTGAGGAGAAGATCGGCGATCTTGCGGGGAAACGGGTCGCCGTCCTCGGCCTCGCCTTC
AAGGACAACACCGACGACATCCGGGAATCCCGGGCGATCCCGGTCATCGCCGAGCTCCTCCGGCGGGGGGCGGCGGTCGC
CGCCTATGACCCGCTTGCTGTACCTTCGATGCGGCGGGTCTTTCCCGGGATCGACTACGCCGCCTCGGCCGCGGACGCCC
TCCGGGGGGCCGACGCCTGCCTGGTGATGACGGAGTGGCCGGAGTTCTCCGATCTCAACGGGGAGTTCGACCTGATGAAG
TCCCGGGTCGTCATCGAGGGGCGCCGGATCCTCTCGTGCGGCGGGAAAGAGGGGATCTGCTGGTGA

Protein sequence : 
MRITVVGGGYVGLVTGACFAELGHTVDIVEIDARKAAAINAGRAPIHERGLDMLLERHAGERLSAGTDYGPVAEADLSFV
CVGTPPAADGSADLSMVAAASRSIGEALRDGNGLHTVVVKSTVPPGTTAGLVVPAILEHSGRNEIGFAMNPEFLREGRAV
EDFLHPDRIVIGSRDDRSGEAVAAVYRGLSAPVVRCGLTAAEMIKYASNALLATKISFSNEVGNVCKRLGIDVYEVMEGV
GMDHRVSPHFLSAGAGFGGSCFPKDVAALVSLAESLGEEPALLRSVLDVNDRQPLRLVGLLEEKIGDLAGKRVAVLGLAF
KDNTDDIRESRAIPVIAELLRRGAAVAAYDPLAVPSMRRVFPGIDYAASAADALRGADACLVMTEWPEFSDLNGEFDLMK
SRVVIEGRRILSCGGKEGICW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
udgA YP_005686369.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 7e-44 42
udgA YP_005682185.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 7e-44 42
udgA YP_003784334.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 7e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Memar_0207 YP_001046123.1 UDP-glucose 6-dehydrogenase VFG0122 Protein 2e-51 41