Gene Information

Name : Memar_1410 (Memar_1410)
Accession : YP_001047321.1
Strain : Methanoculleus marisnigri JR1
Genome accession: NC_009051
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1403473 - 1403691 bp
Length : 219 bp
Strand : +
Note : PFAM: helix-turn-helix domain protein; KEGG: mhu:Mhun_3036 transcriptional regulator, XRE family

DNA sequence :
ATGAAGAACAGGATCAAGGTCTTTCGCGCGATGCACGACATGACCCAGGAGGAGCTTGCCGATGCGATCCGGGTCACCCG
GCGGACGATCAACTCCATCGAGCGGGGGAAGTACAACCCCTCCATCGAGGTCGCCTACAGGATCGCGAAAACCTTCGGTG
TCACCATCGAGGAGGTCTTCTGCTTCGAGGACGGCGAGGATACGGAGGACCGGCGATGA

Protein sequence :
MKNRIKVFRAMHDMTQEELADAIRVTRRTINSIERGKYNPSIEVAYRIAKTFGVTIEEVFCFEDGEDTEDRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 3e-11 43
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-07 42
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-07 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Memar_1410 YP_001047321.1 XRE family transcriptional regulator VFG2168 Protein 1e-07 42
Memar_1410 YP_001047321.1 XRE family transcriptional regulator VFG2175 Protein 1e-07 42