Gene Information

Name : Memar_1352 (Memar_1352)
Accession : YP_001047264.1
Strain : Methanoculleus marisnigri JR1
Genome accession: NC_009051
Putative virulence/resistance : Resistance
Product : copper-translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 1343064 - 1345100 bp
Length : 2037 bp
Strand : +
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: afu:AF0

DNA sequence :
GTGGCCCACGATCACGGGGAGGGCGGACGGCACTACGAGACGCATCCAGAAGAGGCCGCCGGGCAGAAACCGCCGGAGAC
CCGCCGGCCCGGCCACGGCACGCACCGTCACGCCCTCGAGGACTTCCGGCGGCGTTTTGTCGTCTCGACGATACTGACGA
TTCCGATTCTCATCCTCTCGGAGCCGGTCCAGGAACTTCTCGGGATCGTCATCCGGTTCCCGGGCTCGGACTACCTTCTC
CTCGCTCTTGCGACCGTGGTCTATCTCTACGGCGGCCATCCGTTTCTTACCGGCATCGTAAACGAACTGCGGGCGCGGAT
GCCCGGGATGATGACACTCATCGCCGTCGCGATCACCGTCGCCTACGTATACAGTTCGGCGGTCGTTCTCGGTCTCGTCG
GCGGAGAAGGGTTCTTCTGGGAACTCGCCACCCTGATCGACATCATGCTCCTCGGGCACTGGGTGGAGATGCGCTCGGTT
CTCGGGGCGTCGCGGGCGCTCGAGGAACTGGTCCGGGTCATGCCCTCGGAGGCGCACCTTCTCCGGGACGCCGGCACGGA
CGACGTACCCGTCGACCGGCTCGAACCGGGCGACCGGGTCCTCGTCCGGCCCGGAGAGAAGGTGCCGGTGGACGGCACGG
TGATCGAGGGGGCGACGAGCGTCAACGAGGCGATGCTCACCGGGGAGTCGCGCCCGGTGGAGAAGCGCCCGGATGACGAG
GTCATCGGCGGAGCGGTCAACGGCGAGGGCTCGATCGTCGTGGAGGTCCGGCGGACGGGTGCGGAGACCTACCTTGCGCA
GGTGATCGACCTTGTTCGGAAGGCGCAGGAGAGCAGGTCGCGGACGCAGGACCTCGCGGACCGGGCGGCGTTCCTCCTGG
TGGTGATCGCCCTCTCGGTCGGTGCGGTAACGTTCGCGGGATGGTTCGCCCTCGGGGAGGGGACCGGATTCGCGGTGGAG
CGGGCCGCGACCGTTATGGTCATCGCCTGCCCCCACGCGCTCGGCCTCGCCGTCCCGCTCGTGATCGCGGTCTCGACGGC
GCTTGCCGCAAAGTCGGGGTTCCTGATCCGGGACCGGAGCGCGTTCGAGCGGGCAAAAGACCTCACTGCGGTCGTCTTCG
ACAAGACCGGGACCCTGACGACGGGGGTATTCGGGGTCACGGACATCCTCGCCTTCGGCGGCGCGGCGGAGGACGACGTG
GTCCGGGCAACGGCATCGGTTGAGGCGCACTCCGAGCACCCGATCGCCCGGGGCGTCGTCCGGAGCGCGGAGGAGCGGGG
AATCGCTCTGCTCCCGGTAGAACGGTTCCGGGCGATCCCGGGAGTCGGCGTCGAGGGGACGGTCGGCGGCCGGAGCGTCC
GGGTGGTCGGCCCGGGTTACCTCGCGGAGAGCGGCATCGATGCCGGGGACGGGCGGATTCAGGCGCTCCAGCGGCAAGGC
AAGACCGTCGTCTTCCTGCTCGAGGACGACCGGCTCACGGGAGCGCTCGCGCTCGCCGACATCATCAGGCCGGAGTCGGG
AGAGGCGATACGCCGGCTCAAAGAGATGGGCGTCCGGTGCATGATGCTGACCGGGGACAACCGTGACGTCGCCGCATGGG
TGGCGGGGGAACTGGGTCTCGACGAGTTCTTCGCCGGTGTCCTGCCTCATGAGAAGGCGGAGAAGATCCGGGAGGTGCAG
CGCCGGTACCGGGTGGCGATGGTGGGCGACGGGATCAACGACGCACCCGCGCTCGTCGAGGCCGACCTCGGGATCGCCAT
CGGGGCCGGGACCGATGTGGCCGTGGAGAGCGCCGATATCGTTCTGGTGAGGAGCGATCCGCGGGACGCGGCGGCGGTCA
TCGACCTTGCGAAGAAGACCTACCGGAAGATGCTCGAGAACCTCCTCTGGGCAACGGGTTACAATGCCGTCGCCATCCCG
CTCGCCGCCGGGGTTCTGATCGGCGCCGGGATCCTTCTCACGCCGGCCGCAGGGGCGGTGCTGATGAGCGCAAGTACGGT
GATCGTCGCGATCAACGCCAGGTTGCTCCGGATATAG

Protein sequence :
MAHDHGEGGRHYETHPEEAAGQKPPETRRPGHGTHRHALEDFRRRFVVSTILTIPILILSEPVQELLGIVIRFPGSDYLL
LALATVVYLYGGHPFLTGIVNELRARMPGMMTLIAVAITVAYVYSSAVVLGLVGGEGFFWELATLIDIMLLGHWVEMRSV
LGASRALEELVRVMPSEAHLLRDAGTDDVPVDRLEPGDRVLVRPGEKVPVDGTVIEGATSVNEAMLTGESRPVEKRPDDE
VIGGAVNGEGSIVVEVRRTGAETYLAQVIDLVRKAQESRSRTQDLADRAAFLLVVIALSVGAVTFAGWFALGEGTGFAVE
RAATVMVIACPHALGLAVPLVIAVSTALAAKSGFLIRDRSAFERAKDLTAVVFDKTGTLTTGVFGVTDILAFGGAAEDDV
VRATASVEAHSEHPIARGVVRSAEERGIALLPVERFRAIPGVGVEGTVGGRSVRVVGPGYLAESGIDAGDGRIQALQRQG
KTVVFLLEDDRLTGALALADIIRPESGEAIRRLKEMGVRCMMLTGDNRDVAAWVAGELGLDEFFAGVLPHEKAEKIREVQ
RRYRVAMVGDGINDAPALVEADLGIAIGAGTDVAVESADIVLVRSDPRDAAAVIDLAKKTYRKMLENLLWATGYNAVAIP
LAAGVLIGAGILLTPAAGAVLMSASTVIVAINARLLRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 3e-84 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Memar_1352 YP_001047264.1 copper-translocating P-type ATPase BAC0629 Protein 0.0 69
Memar_1352 YP_001047264.1 copper-translocating P-type ATPase BAC0079 Protein 7e-116 44
Memar_1352 YP_001047264.1 copper-translocating P-type ATPase BAC0383 Protein 9e-94 44
Memar_1352 YP_001047264.1 copper-translocating P-type ATPase BAC0101 Protein 2e-76 42
Memar_1352 YP_001047264.1 copper-translocating P-type ATPase BAC0183 Protein 9e-77 42
Memar_1352 YP_001047264.1 copper-translocating P-type ATPase BAC0568 Protein 1e-65 41