Gene Information

Name : Memar_1342 (Memar_1342)
Accession : YP_001047254.1
Strain : Methanoculleus marisnigri JR1
Genome accession: NC_009051
Putative virulence/resistance : Resistance
Product : ABC transporter-related protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1328119 - 1329024 bp
Length : 906 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afu:AF1136 ABC-2 type transport system ATP-binding protein

DNA sequence :
ATGATACGAACGGAGAACCTCACGAAGGTATATAATGGAAAAACAGCCGTCGACGGCCTGGACCTCGTGGTCGGGGAAGG
CGAGATATTCGGTTTCCTCGGCCCGAACGGAGCGGGAAAGAGCACGACGATCCTGATGCTCACCGGTATGATCGAGCCCA
CCGGCGGACGGTGCTTCGTCGACGGGATCGAGGTCGCAAAAGACCCGCTGAACGTGAAGAAGATCATCGGCTACCTCCCC
GAAGACGTCGGGTTCTACGGGAACATGACCGGCGAGCAGAACCTGGATTATTTCGCACGGTTCTACGGGATGGACGCGAA
GGAGAGAAAGGAGCGGATCGCAGAACTGCTCGAACTCGTCCATCTCGACGGCGTCGCCCAGAAGGCAGGAGAGTACTCCC
GCGGCATGAAGCAGCGGCTCGGGCTCGCCCAGGCGCTGATCAACGATCCTAAAGTGCTCTTCCTCGACGAACCGACGGCA
AACCTCGACCCCGAGGGCGTCCGGGAGTACCGGGAACTCGTCACCCACCTCGCCGGCGAAGGGAAGACGATCTTCGTCTC
CTCCCACATCCTCTCCGAGGTCCGGGAGGTCTGCCGGACGGTGGGGCTCCTCGCGAAAGGAAAACTTGCCGCGCAGGGGA
CGCTCGAAGAGGTCGCCCGGGCGCTGGCACCTGCAGACGGCGATGCCGTCCGGATCGTCGTCGAGACCAGGGAGCGCCTG
CCGGCGATCGACGACCCCGCGGTCATCGATATCGAGAGGAACGGAAACCGTGCGGTCGTCCGGGCGAAGGCCGATATCCG
GGACCGGCTCTCCGCGACTCTCTTCGAGCAGGGGCTGCACGTCCGGGAGATGCGTCTTGAGGAGCCTGAGATAGAGGACG
TCTTCATGGCGGCCTACCGGAGGTAG

Protein sequence :
MIRTENLTKVYNGKTAVDGLDLVVGEGEIFGFLGPNGAGKSTTILMLTGMIEPTGGRCFVDGIEVAKDPLNVKKIIGYLP
EDVGFYGNMTGEQNLDYFARFYGMDAKERKERIAELLELVHLDGVAQKAGEYSRGMKQRLGLAQALINDPKVLFLDEPTA
NLDPEGVREYRELVTHLAGEGKTIFVSSHILSEVREVCRTVGLLAKGKLAAQGTLEEVARALAPADGDAVRIVVETRERL
PAIDDPAVIDIERNGNRAVVRAKADIRDRLSATLFEQGLHVREMRLEEPEIEDVFMAAYRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 6e-32 42
cdd4 CAA63569.1 - Not tested PaLoc Protein 2e-35 42
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 1e-29 41
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 1e-29 41