Gene Information

Name : Rsph17029_3075 (Rsph17029_3075)
Accession : YP_001044947.1
Strain :
Genome accession: NC_009050
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 91007 - 91669 bp
Length : 663 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_3430 transcriptional regulator, winged helix family

DNA sequence : 
ATGCGGATTCTGATCGTCGAGGATGATCCGGTGCTGGCGGACGGGCTGCAGGTGGGCCTCCGGCTGGCGGGCTTCGTGCC
CGAAGCGGTGGGCACGCTGGAGGATGCGCGCGCGGCGCTGGATGCCGGCCGGTTCGAGGCGATGGTGCTCGACCTGATGC
TGCCCGACGGCTCGGGGCTCGAGCTTCTCGCCGAGCTTCGGGCCGCGCGCGAGCCGGTGCCGGTGCTGGTGCTGACGGCG
CGCGACCGGCTGGACGACCGGGTGCGGGGGCTGGATCTCGGCGCGGACGACTATCTTGGCAAGCCCTTCGAGCTCGAGGA
GCTGGCGGCCCGCCTGCGCGCCCTCGGCCGCCGCCCGGCGGCGCTGGCCACCACCCGGCCCGAATGGAACGGCGTGGCCC
TCGACCTCGCGGCGATGGAGGCCTCGCGCGATGGCCGGCCGGTGGCGCTCTCGCCGCGGGAGTTCGCCGTCCTCCGTGCC
CTCATGGCCCACCCCCGTGCGATCCTGAGCAAGGCCCAGATCGAGGAGCAGCTCTACGGCTGGCAGGAGGAGATCGAGAG
CAACGCGATCGAGGTCCATGTCCACAAGCTGCGCGCCAAGCTCGGGCACGGCTTCATCGAGACGGTGCGCGGCGTTGGCT
ATCGGCTGGCGGAGGCCTCGTGA

Protein sequence : 
MRILIVEDDPVLADGLQVGLRLAGFVPEAVGTLEDARAALDAGRFEAMVLDLMLPDGSGLELLAELRAAREPVPVLVLTA
RDRLDDRVRGLDLGADDYLGKPFELEELAARLRALGRRPAALATTRPEWNGVALDLAAMEASRDGRPVALSPREFAVLRA
LMAHPRAILSKAQIEEQLYGWQEEIESNAIEVHVHKLRAKLGHGFIETVRGVGYRLAEAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-16 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17029_3075 YP_001044947.1 two component transcriptional regulator BAC0083 Protein 2e-15 43
Rsph17029_3075 YP_001044947.1 two component transcriptional regulator BAC0487 Protein 2e-20 43
Rsph17029_3075 YP_001044947.1 two component transcriptional regulator NC_002516.2.879194.p Protein 5e-13 42
Rsph17029_3075 YP_001044947.1 two component transcriptional regulator U82965.2.orf14.gene. Protein 4e-15 42
Rsph17029_3075 YP_001044947.1 two component transcriptional regulator Y16952.3.orf35.gene. Protein 8e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17029_3075 YP_001044947.1 two component transcriptional regulator VFG0473 Protein 1e-24 44
Rsph17029_3075 YP_001044947.1 two component transcriptional regulator VFG1389 Protein 1e-09 43
Rsph17029_3075 YP_001044947.1 two component transcriptional regulator VFG1390 Protein 1e-15 41