Gene Information

Name : Rsph17029_3287 (Rsph17029_3287)
Accession : YP_001045155.1
Strain :
Genome accession: NC_009050
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 349681 - 350370 bp
Length : 690 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3602 ABC efflux transporter, ATPase subunit

DNA sequence : 
ATGAGCGAGACGATCCTAGCGCTGAAGGACGCGCGGCTGACGTTGGCGGGAAACGCAGGCCCGGTCGAGATCCTGAAGGG
GATCAGTCTGGACGTGCGGCGCGGCGAGACGCTGGGGCTCGTGGGGCCTTCGGGATCGGGCAAGTCGTCGCTCCTGATGC
TGATGGGCGGGCTGGAGCGCGCCACCGGCGGCACGGTCACGGCACTGGGCCAGGACCTGACGGCGATGGACGAGGACCAG
CTCGCGCGGTTCCGCCGGGGGAATATGGGCGTCGTCTTCCAGTCTTTCCACCTCATCCCCACGATGACGGCACTTGAAAA
TGTCGCGATCCCGCTGGAGCTTGCCGGCGCGCCCGATGCCTTCGCCCGCGCCGAGGCCGAGCTGCGCGCCGTGGGGCTCG
GGCCCCGGATCGACCATTATCCCTCGCAGATGTCGGGGGGCGAGCAGCAGCGGGTGGCGCTGGCGCGTGCCGCGGCCCCC
CGGCCCGCCATCCTTCTGGCCGACGAGCCGACGGGCAATCTCGACGGGGTGAACGGGGCCGCGATCATGGATCTCCTGTT
CGGGCTGCGCGACCGGCACGGGGCGACGCTGGTCCTCGTGACCCATGCGCCCGAGCTTGCGGCGCGCTGCGACCGGGTGG
TGCGGCTGGCCGACGGGCGCATCGCGGGCGAGGAGCGCAAGGCGGCATGA

Protein sequence : 
MSETILALKDARLTLAGNAGPVEILKGISLDVRRGETLGLVGPSGSGKSSLLMLMGGLERATGGTVTALGQDLTAMDEDQ
LARFRRGNMGVVFQSFHLIPTMTALENVAIPLELAGAPDAFARAEAELRAVGLGPRIDHYPSQMSGGEQQRVALARAAAP
RPAILLADEPTGNLDGVNGAAIMDLLFGLRDRHGATLVLVTHAPELAARCDRVVRLADGRIAGEERKAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-14 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-16 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-16 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-16 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17029_3287 YP_001045155.1 ABC transporter NC_008702.1.4606598. Protein 1e-22 45
Rsph17029_3287 YP_001045155.1 ABC transporter NC_012469.1.7686878. Protein 7e-23 42