Gene Information

Name : Rsph17029_3176 (Rsph17029_3176)
Accession : YP_001045048.1
Strain :
Genome accession: NC_009050
Putative virulence/resistance : Virulence
Product : betaine-aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 203759 - 205246 bp
Length : 1488 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_3533 aldehyde dehydrogenase family protein

DNA sequence :
ATGCTGCAAGAGATCGACTGGCACGCCCGCGCCAAAGCCGTGGCCCTTCCGAACCGTCCCTTCATCGACGGCCAGTATGT
CGACAGCCTGTCGGGCGAGACCTTCGCCTGCATCTATCCCGGCGATGGGCGGCCGCTGACCGATGTGGCCTCGTGCAATG
CGGCGGATGTGGATGTCGCGGTGCGGTCGGCCCGCCGGGCCTTCGAGGCGGGGGTCTGGTCGCGGATGGCCCCGGCCGAC
CGGCGCCGCATCCTGCTGCGCTTCTCCGAGCTGATCCTCGCGAACCGCGAGGAGCTGGCGCTCCTCGAGACGCTGAACGT
GGGCAAGCCCATCGCCAATGCCTACAACGGCGACGTGGTGAGCGCTGCCGCCTGCATCGCCTGGTATGCCGAGGCGATCG
ACAAGGTCTATGGCGAGGTGGCGGCCACGGCGCACGACATGACGACGCTCGTCATGCGCGAGCCCTTGGGGATCGTGGCG
GCCGTGGTGCCGTGGAACTATCCGATGTCGATGGCCGCCTGGAAGCTCGGGCCGGCGCTCGCCACCGGCAACTCGGTGAT
CCTGAAGCCCGCCGAACAATCGCCCTTCACCGCGCTGAAGTTCGGCGAACTCGCCATCGAGGCGGGGATGCCTCCGGGGG
TGCTGAACGTGGTACCGGGCCTCGGCCATATCGCGGGCAAGGCGCTCGGGCTGCATATGGATGTCGATTGTGTGGGCTTC
ACCGGCTCGACCGAAGTCGGCAAGTACTTCATGCAATATTCGGGCCAGTCGAACATCAAGCGCATCGGGCTCGAACTCGG
CGGCAAGTCGCCCCAGGTCGTGCTCGCGGATTGCGACGATCTCGATGCGGCGGCGGCCGGGATTGCGGCCGGCATCTTCG
CCAACACCGGGCAGGTCTGCAACGCGGGCTCGCGCCTGATCGTGGACGAGAAGATCCACGACCAGCTCCTCGAGAAGATC
GCGGCTCAGGCCAAGGTCTTCGCGCCCGGCGATCCGCTCGACACCGCCACCCGCATGGGCTCGATGGTGAGCGAAGAGCA
GATGGACCGCGTGCTGGGCTACATCGACGCCGGCCGCGCGGACGGTGCACGGCCGGTCATCGGCGGCGGCCGGGTGAAGA
CCGAAACCGGCGGCTTCTACATCGAACCCACGATCTTCGAGGGCGTGCGCAACGACATGAAGATCGCGCAGGAAGAGATC
TTCGGGCCGGTGCTGTCGGCCATCCCGGTGAAGGGCTTCGACGAGGCGATGGCGGTGGCCAATGACACGGTCTACGGGCT
TGCGGGCGCGGTCTGGACCGGGTCGGTGAAGAACGCGCACCGGGCGGCCAAGTCGCTCCGCGCGGGCGTGGTCTGGGTCA
ACTGCTTCGACCGCGGCTCGCTCGCCGTGCCCTTCGGCGGCTTCAAGCAATCGGGCTTCGGCCGGGACAAGTCGCTGCAT
GCGATGGACAAATACACCGACCTCAAGGCCGTCTGGTTCGCTCACTGA

Protein sequence :
MLQEIDWHARAKAVALPNRPFIDGQYVDSLSGETFACIYPGDGRPLTDVASCNAADVDVAVRSARRAFEAGVWSRMAPAD
RRRILLRFSELILANREELALLETLNVGKPIANAYNGDVVSAAACIAWYAEAIDKVYGEVAATAHDMTTLVMREPLGIVA
AVVPWNYPMSMAAWKLGPALATGNSVILKPAEQSPFTALKFGELAIEAGMPPGVLNVVPGLGHIAGKALGLHMDVDCVGF
TGSTEVGKYFMQYSGQSNIKRIGLELGGKSPQVVLADCDDLDAAAAGIAAGIFANTGQVCNAGSRLIVDEKIHDQLLEKI
AAQAKVFAPGDPLDTATRMGSMVSEEQMDRVLGYIDAGRADGARPVIGGGRVKTETGGFYIEPTIFEGVRNDMKIAQEEI
FGPVLSAIPVKGFDEAMAVANDTVYGLAGAVWTGSVKNAHRAAKSLRAGVVWVNCFDRGSLAVPFGGFKQSGFGRDKSLH
AMDKYTDLKAVWFAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-114 55
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17029_3176 YP_001045048.1 betaine-aldehyde dehydrogenase VFG0082 Protein 4e-68 41