Gene Information

Name : Rsph17029_3156 (Rsph17029_3156)
Accession : YP_001045028.1
Strain :
Genome accession: NC_009050
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 179480 - 180142 bp
Length : 663 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_3511 two component transcriptional regulator, winged helix family family

DNA sequence : 
ATGCGCGCGCTGGTGGTCGAGGATGATGCGCGGATCGCGCAGGATCTGAGCGTCGCGCTCGGCTCGGCCGGCTTCAGGGT
CGAGACGGCCGCCGACGGCGAGACCGCGTGGTTTCTGGGCGGGACAGAGAGCTACGATCTGATCGTGCTCGACCTCGGCC
TGCCGAAGCTCGATGGCCTCGCCGTGCTGAAGCGATGGCGGGCGGAGGGCGTGGAGATCCCGGTGCTGGTGCTGACGGCG
CGGGGCACCTGGACCGAGCGCGTGGAAGGCATCGATGCGGGGGCCGACGACTATCTGCCCAAGCCCTTCCGGATCGAGGA
ACTGGTCGCCCGCGCCCGGGCGCTCGTGCGCCGCTCGACCGGCCGGGCCGCGCCCCTGCAGAGCGTGGGGCGGCTCGCGC
TCGACATGAACCGCATGACCGCGACCCTCGACGGCCTGCCGCTCGGCCTCGCACCGCTGGAATTCCGCCTGCTGGCCTAT
CTGATGCTGCACCGCGACAGGGTCGTGCCGCCGACCGAGCTTCTCGAACATCTTTACGGCGACAACGATGCCCGCGAGGC
GAATGCCCTCGAAGCGGTGGTGGCGCGACTGCGCCGCAAGGTCGGGCGCGGCGTCATAGGCACGCGGCGCGGCTTCGGTT
ACCAGCTCGAAGCGGGCCCGTGA

Protein sequence : 
MRALVVEDDARIAQDLSVALGSAGFRVETAADGETAWFLGGTESYDLIVLDLGLPKLDGLAVLKRWRAEGVEIPVLVLTA
RGTWTERVEGIDAGADDYLPKPFRIEELVARARALVRRSTGRAAPLQSVGRLALDMNRMTATLDGLPLGLAPLEFRLLAY
LMLHRDRVVPPTELLEHLYGDNDAREANALEAVVARLRRKVGRGVIGTRRGFGYQLEAGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-23 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17029_3156 YP_001045028.1 two component transcriptional regulator NC_002516.2.879194.p Protein 7e-38 45
Rsph17029_3156 YP_001045028.1 two component transcriptional regulator BAC0487 Protein 9e-31 44
Rsph17029_3156 YP_001045028.1 two component transcriptional regulator CP000647.1.gene1136. Protein 4e-36 41
Rsph17029_3156 YP_001045028.1 two component transcriptional regulator BAC0530 Protein 4e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17029_3156 YP_001045028.1 two component transcriptional regulator VFG0473 Protein 1e-28 43
Rsph17029_3156 YP_001045028.1 two component transcriptional regulator VFG1390 Protein 2e-22 41