Gene Information

Name : Rsph17029_0086 (Rsph17029_0086)
Accession : YP_001041978.1
Strain :
Genome accession: NC_009049
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 97368 - 98135 bp
Length : 768 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1437 ABC Fe+3 hydroxamate (ferrichrome) transporter, ATPase subunit

DNA sequence : 
ATGACCCTTTTCTCGATCCGCGATCTCTCCGTCGACGTGCCCGGCCGGCGGCTTCTCGAAGGGATCAGCCTCGATCTGCC
GCAGGGTCGGGTCACGGGCCTGATCGGGCACAACGGCTCGGGCAAGTCGACGCTGCTGAAGGTGCTGGCGCGCCAGATCG
AGGCCAGGGGCGCCGTCGCCTTCGAGGGTCGCGCGCTGGCGGGATGGAGCGCCCGCGACTATGCCCGCCGCCTCGCCTTT
CTGCCCCAGACCACGCCCCCGGCCGAGGGGATGCTGGTGCGCGAGCTGGTGGAGCTCGGCCGCTATCCCTGGCACGGCGC
GCTCGGCCGGTTCGGGCAGCAGGATGAGACCGTCGTCGCGCGGGCGATGGCCGAATGCGGCGTCGAGCGCTTTGCCGATC
GGCTCGTCGACACGCTTTCGGGCGGCGAGCGCCAGCGGGTGTGGCTTGCGATGATGGTGGCGCAGCAGGCCTCGACGCTG
CTTCTGGACGAGCCGATCTCGGCGCTCGATATCGCCCACGCTGTCGAGGTGATGCGGCTCGTCCGCACCATGTGCCGCGA
GGAGGGGCGCAGCGTGGTCGTGGTGCTGCACGAGGTGAACATGGCCGCGCAGTTCTGCGATCACATCGTCGCGCTGAAGC
AGGGGCAGGTCGTCCTCGAAGGCCCGCCCGACGAGCTGATGACGGCCGAGCGGCTTCAGCAGATCTATTCGGTGAGGATG
GAGGTCCTGCACCGGGCCGACGGTCAGAGGGTGGCCGTGCCGGCCTAG

Protein sequence : 
MTLFSIRDLSVDVPGRRLLEGISLDLPQGRVTGLIGHNGSGKSTLLKVLARQIEARGAVAFEGRALAGWSARDYARRLAF
LPQTTPPAEGMLVRELVELGRYPWHGALGRFGQQDETVVARAMAECGVERFADRLVDTLSGGERQRVWLAMMVAQQASTL
LLDEPISALDIAHAVEVMRLVRTMCREEGRSVVVVLHEVNMAAQFCDHIVALKQGQVVLEGPPDELMTAERLQQIYSVRM
EVLHRADGQRVAVPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-44 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-47 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17029_0086 YP_001041978.1 ABC transporter BAC0164 Protein 6e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17029_0086 YP_001041978.1 ABC transporter VFG1042 Protein 5e-44 42