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Name : Rsph17029_2565 (Rsph17029_2565) Accession : YP_001044439.1 Strain : Genome accession: NC_009049 Putative virulence/resistance : Virulence Product : ABC-3 protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 2702320 - 2703180 bp Length : 861 bp Strand : + Note : PFAM: transport system permease protein; ABC-3 protein; KEGG: rsp:RSP_0906 ABC Mn+2/Fe+2 transporter, inner membrane subunit SitC DNA sequence : ATGAGCGCGGCTGAGCTCTGGGAGCCGTTCCTCTACGGCTACATGACCAACGCCATGTGGGTCTCGGCGCTGGTGGGGGC GGTCTGTGCCTTCCTGTCCTGCTTCCTGATGCTGAAGGGCTGGTCGCTGATCGGCGACGCGCTCTCGCATTCCGTCGTGC CGGGCGTGGCGGGCGCCTATGTGCTGGGCCTGCCCTTCGCGCTCGGCGCCTTCCTTGCGGGCGGGCTCGCGGCGGGGGCC ATGCTCTTCCTCTCCGGCCGCAGCGGGCTCAAGACCGACGTGGTGATCGGGCTGATCTTCACCTCCTTCTTCGGGCTCGG CCTCTTCATGATCTCGGTCGATCCGATGGCGATCTCGATCCAGACCATCATCATGGGCAACATCCTCGCCATCTCGCCCT ATGACACGGCGCAGCTCGCGGTGATCGGGGTGGTCTCGCTCGCGATCCTGCTCGCGACATGGAAGGACCTGATGGTGACC TTCTTCGACGAGACCCACGCCCGTTCCATCGGGATCCGCACGGGGGCGATGAAGCTTCTGTTCTTCACGCTACTCTCGGC CTCCATCGTGGCGGCGATGCAGACGGTGGGGGCCTTCCTCGTGATCGCCATGGTGGTGACGCCCGGCGCCACGGCCTACC TGCTCTGCGACCGCTTCCCGCGCCTGCTGACACTGGCCGTGGCCATCGGAGCCGCCACGGGCTTCCTCGGGGCCTACATC TCCTATTTCCTCGACGGGGCCACGGGGGCGGTGATCGTGACGCTGCAGACGGCGCTCTTCCTGCTGGCCTTCACCTTCGC GCCCAAGCACGGGATGCTGGCCGCCCGCCGCCGCGCTGCCGAGGCGCTGGAGCAGCCATGA Protein sequence : MSAAELWEPFLYGYMTNAMWVSALVGAVCAFLSCFLMLKGWSLIGDALSHSVVPGVAGAYVLGLPFALGAFLAGGLAAGA MLFLSGRSGLKTDVVIGLIFTSFFGLGLFMISVDPMAISIQTIIMGNILAISPYDTAQLAVIGVVSLAILLATWKDLMVT FFDETHARSIGIRTGAMKLLFFTLLSASIVAAMQTVGAFLVIAMVVTPGATAYLLCDRFPRLLTLAVAIGAATGFLGAYI SYFLDGATGAVIVTLQTALFLLAFTFAPKHGMLAARRRAAEALEQP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 3e-72 | 75 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 3e-72 | 75 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 2e-72 | 75 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 3e-72 | 74 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 3e-72 | 74 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 2e-33 | 42 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 2e-33 | 42 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 3e-33 | 42 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 2e-33 | 42 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 2e-33 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rsph17029_2565 | YP_001044439.1 | ABC-3 protein | BAC0351 | Protein | 1e-72 | 75 |
| Rsph17029_2565 | YP_001044439.1 | ABC-3 protein | BAC0441 | Protein | 1e-57 | 64 |
| Rsph17029_2565 | YP_001044439.1 | ABC-3 protein | BAC0352 | Protein | 1e-33 | 42 |
| Rsph17029_2565 | YP_001044439.1 | ABC-3 protein | BAC0442 | Protein | 3e-30 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rsph17029_2565 | YP_001044439.1 | ABC-3 protein | VFG0527 | Protein | 1e-72 | 75 |
| Rsph17029_2565 | YP_001044439.1 | ABC-3 protein | VFG0528 | Protein | 1e-33 | 42 |
