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Name : Rsph17029_2136 (Rsph17029_2136) Accession : YP_001044011.1 Strain : Genome accession: NC_009049 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 2263621 - 2264901 bp Length : 1281 bp Strand : - Note : TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_0484 TRAP-T family transporter, DctM (12 TMs) subunit DNA sequence : TTGGAGCTCTTCATCCTGTTCGGAAGCTTCGTCTTCCTTCTCCTGATCGGCACGCCCGTCGCCTTCTGCCTCGGCGTGTC GAGTTTCCTCACTGTGCTCTATCTGGGCCTGCCGCCGGTCGTCGTGTTCCAGCGCCTCAACTCGGGCGTCTCGGTCTATG CGCTGATGGCCATCCCCTTCTTCATCTATTCGGGCGATCTGATGGTGCGGGGCGACATCGCCCGACGGCTCGTGGCGCTG GCAGGCGCGCTGGTCGGCCACCTCCGGGGCGGGCTCGGACAGGTGAACGTCGTGGCCTCGGTCATGTTCGGCGGCGTCTC GGGCTCGGCCGCGGCGGATGCCTCGGCGGTGGGCGGCCTCATGGTGCCGCAGATGAAGGCCCGCGGCTACGGTGTCGACT ATGCCGTGAACCTGACCGTCGTGGGCTCGATCATCGCGCTGATGATCCCGCCCTCGCACAACATGATCATCTATTCCATC GCCGCGGGCGGCCGGATCTCGATCGCGGACCTCTTCACGGCAGGCATCATCCCGGGCCTCCTGCTCGCGCTGGGGCTGAT GGTGGCGGCCTATTTCGTGGCCCGCCGCCGCGGCTACCCCACCGAGCGCTTTCCGGGGCTGCGCGCGCTCGGTGCCATCT TCGTGAGCGCCGTGCCGGGGCTCATCCTCGTCGCGCTGATCTTCGGCGGCGTGCGCTCGGGCATCTTCACCGCCTCGGAA AGCGCCAACATCGCCGTTGTCTATGCGCTGCTCGTCACTATCCTGATCTACCGCACCCTCACCTGGTCCGAGTTCGTCCA TGCCACCATCGGCGCGGTGCGCACGACGGCCATGGTGCTGCTCGTGATCGGCTGCGCGGCCTCGTTCGGCTGGCTTCTGG CCTATCTCAAGGTGCCGACGGCGCTGGTGGCCTTCATGCAGGGGCTGTCGGACAATCCGCTGGTGATCCTGCTTCTCATC AACGTGGCGCTTCTTGTGCTCGGCACCTTCATGGACATGTCGCCGCTGATCGTCATCACGACGCCGATCTTCCTGCCGGT GGCGCAGGCCTTCGGGGTGGATCCGGTGCACTTCGGCGTCATCCTGATCCTGAACCTCGGGATCGGCCTCTGCACGCCGC CCGTCGGTGCGGTGCTCTTCGTGGGCTGCGCCGTGGGGCGGATCTCGATCTGGACGGCGATGCGCACGATCTGGCCCTTC TACGGGGCGGCCCTCGCCGTCCTGCTGCTCGTGACCTACATCCCGGCGCTGTCGCTGTGGCTGCCGGCCCAATTCCGCTG A Protein sequence : MELFILFGSFVFLLLIGTPVAFCLGVSSFLTVLYLGLPPVVVFQRLNSGVSVYALMAIPFFIYSGDLMVRGDIARRLVAL AGALVGHLRGGLGQVNVVASVMFGGVSGSAAADASAVGGLMVPQMKARGYGVDYAVNLTVVGSIIALMIPPSHNMIIYSI AAGGRISIADLFTAGIIPGLLLALGLMVAAYFVARRRGYPTERFPGLRALGAIFVSAVPGLILVALIFGGVRSGIFTASE SANIAVVYALLVTILIYRTLTWSEFVHATIGAVRTTAMVLLVIGCAASFGWLLAYLKVPTALVAFMQGLSDNPLVILLLI NVALLVLGTFMDMSPLIVITTPIFLPVAQAFGVDPVHFGVILILNLGIGLCTPPVGAVLFVGCAVGRISIWTAMRTIWPF YGAALAVLLLVTYIPALSLWLPAQFR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 1e-34 | 41 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 1e-34 | 41 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 1e-34 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rsph17029_2136 | YP_001044011.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 6e-35 | 41 |
