Gene Information

Name : Rsph17029_0193 (Rsph17029_0193)
Accession : YP_001042084.1
Strain :
Genome accession: NC_009049
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 213402 - 214082 bp
Length : 681 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1542 ABC transporter, ATPase subunit

DNA sequence :
GTGCGGGTGAAGGATCCTTCGGACAAGCTGCTCTCGCTCGAGGGCGTGACCAAAAGCTACGCGACCGGCGAGGGGCCGGT
GCAGGTTCTGGCCGGGGTGGACCTGACGCTCGCCGCGGGCGAGAGCCTCGCGCTGACGGGAGAGTCGGGCAGCGGCAAGA
GCACGCTCCTGCATCTGGCGGCCGGGCTCGATGCGGCGGACGCGGGCCGGATCGTCGTGGCGGGCCATGATATCTCGCAG
GCCGGCGATGCCGATCGCGCGCGTCTGCGGCGAGGCACGGTCGGGCTCGTCTTCCAGCAGTTCAACCTGATCCCCTCGCT
CGACGTGGCGGCCAATCTTGCCTTTCAGGCCCGCCTCGCCGGGCGGCACGATCCCCAATGGCAGGCCGAGCTGGCCGAGA
CGCTGGGGCTTGCCGCCTGTCTGCACCGCTATCCCGAGCAGCTCTCGGGCGGCCAGCAGCAGCGGGTGGCCATCGGCCGG
ACGCTCGCCGCCCGCCCCCGCCTCGTGCTGGCCGACGAGCCCACCGGCAACCTCGACGAGGCCACGGGCGATGCCGTCAT
CGCGCTCTTCCTGCGCCTCGTGAGCCAGACCGGCGCCGGGCTTCTGATGGTCACCCATTCGGCCCGCCTCGCGGGGCGGC
TTCAGGGCCGGGTGCAGCTCTCGGCGGGGCGGGTCGCATGA

Protein sequence :
MRVKDPSDKLLSLEGVTKSYATGEGPVQVLAGVDLTLAAGESLALTGESGSGKSTLLHLAAGLDAADAGRIVVAGHDISQ
AGDADRARLRRGTVGLVFQQFNLIPSLDVAANLAFQARLAGRHDPQWQAELAETLGLAACLHRYPEQLSGGQQQRVAIGR
TLAARPRLVLADEPTGNLDEATGDAVIALFLRLVSQTGAGLLMVTHSARLAGRLQGRVQLSAGRVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-32 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-32 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-32 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17029_0193 YP_001042084.1 ABC transporter CP001581.1.gene798.p Protein 5e-32 42
Rsph17029_0193 YP_001042084.1 ABC transporter NC_008702.1.4606598. Protein 4e-25 41