|
Name : Rsph17029_0129 (Rsph17029_0129) Accession : YP_001042021.1 Strain : Genome accession: NC_009049 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 143652 - 145271 bp Length : 1620 bp Strand : - Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_1478 ABC oligopeptide transporter, fused ATPase subunits DNA sequence : ATGGAGCCCGTTCTCGATGTGAAGGGCCTCCGGGTCGCCTTCCAGACCAATGACGGCGAGGTTCAGGCCGTGCGCGGGAT CGACCTCTCGGTGATGCCCGGCGAGACCGTGGCCATCGTGGGCGAATCCGGCTCGGGCAAGAGCCAGACCACCATGGCGC TGATGGGGCTTCTGGCGCAGAACGGCCGGGCCACCGGCTCGGCCCTCTACCGCGGGCGCGAGCTGATCGGCCTGTCCGAG CGCGAGCTGAACAAGGTGCGCGGCGACAAGATCACCATGATCTTCCAGGAGCCGATGACCTCGCTCGACCCGCTCTACCG GATCGGCGACCAGCTGGCCGAGCCGCTGCGCTTCCACCGCGGGCTCTCGAAACGCGAGGCGCGGCCCCGGATCGTCGAGC TTTTGCGCCTCGTGGGCATCCCCGAGCCCGAGCGGCGGATCGACAGCTATCCGCACGAACTGTCGGGCGGGCAGCGCCAG CGGGTGATGATCGCCATGGCGCTCGCCTGCGATCCCGACATCCTGATCGCCGACGAGCCCACCACCGCGCTCGACGTGAC GATTCAGGCGCAGATCCTGACCCTGCTCGCCGATCTGCAGAAGCGGCTCGGCATGGCGATCCTCTTCATCACCCATGACC TCGGCATCGTGCAGCGCTTCGCCGACCGGGTCTATGTGATGCAGGCGGGCGAGGTGGTCGAGACCGGCGAGACCGCGGCG CTGTTCGAGGCGCCGTCGCATCCCTATACGCGGATGCTGCTCGATGCCGAGCCCGAGGGGACGAAGGCGCCGCCGCCCGA GACGGCGCCGGTGCTGATGGAGGGCCGCAACGTCGAGGTGGTCTTCTCGAGCGGCGGCGGCCTCTTCGAGGCGCCGAACA AGCTGCGCGCCGTGGACGGCGTGTCGGTCCGGCTGCGGCAGGGCCAGACCATCGGGGTGGTGGGCGAGTCCGGGTCGGGC AAGTCCACCCTCGGGCGCGCGCTCCTGCGGCTGCTGCCCTCGGCGGGCCTCGTGACCTTCGAGGGGCGCGAGCTCGCCCG CGACGCGGCCGAGATGCGCCCGCTGCGACGCCGGATGCAGCTCGTCTTCCAGGATCCGTTCGGCTCGCTCTCGCCGCGGA TGACCGTGGGGCGGATCATCACCGAAGGCCTCAAGATCCACGAGCCGGACCTTTCCACCCGCGAGCGCGACCGCCGCGCG GGCGAGGCGCTGGCCGAGGTGGGCCTCAGCCCCGCGATGCGCAACCGCTACCCGCACGAGTTTTCAGGCGGCCAGCGCCA GCGCATCGCCATCGCCCGGTCGATGATCCTGAAGCCCAGGGTGATCGTTCTGGACGAGCCGACCTCGGCCCTCGACCGGT CGGTGCAGAAGCAGATCGTGGACCTGCTGCGCGACCTGCAGGCGCGGCACGGGCTCTCCTACCTCTTCATCAGCCACGAC CTCGCCGTGGTCCGGGCACTGGCCGACTATATCCTCGTGATGAAGGAGGGCCGCATCGTCGAGGAGGGCCAGACCGCCGA CATCTTCGACCGTCCGCAGGAGGCCTACACCCGGACGCTCATGGCCGCCGCGCTCGAGACGCGGCGCTTTCGCGAGGAGG CGGAACGGACGGGCGTCTGA Protein sequence : MEPVLDVKGLRVAFQTNDGEVQAVRGIDLSVMPGETVAIVGESGSGKSQTTMALMGLLAQNGRATGSALYRGRELIGLSE RELNKVRGDKITMIFQEPMTSLDPLYRIGDQLAEPLRFHRGLSKREARPRIVELLRLVGIPEPERRIDSYPHELSGGQRQ RVMIAMALACDPDILIADEPTTALDVTIQAQILTLLADLQKRLGMAILFITHDLGIVQRFADRVYVMQAGEVVETGETAA LFEAPSHPYTRMLLDAEPEGTKAPPPETAPVLMEGRNVEVVFSSGGGLFEAPNKLRAVDGVSVRLRQGQTIGVVGESGSG KSTLGRALLRLLPSAGLVTFEGRELARDAAEMRPLRRRMQLVFQDPFGSLSPRMTVGRIITEGLKIHEPDLSTRERDRRA GEALAEVGLSPAMRNRYPHEFSGGQRQRIAIARSMILKPRVIVLDEPTSALDRSVQKQIVDLLRDLQARHGLSYLFISHD LAVVRALADYILVMKEGRIVEEGQTADIFDRPQEAYTRTLMAAALETRRFREEAERTGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-86 | 44 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-86 | 44 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-86 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-86 | 44 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 6e-110 | 44 |
