Gene Information

Name : Rsph17029_1031 (Rsph17029_1031)
Accession : YP_001042914.1
Strain :
Genome accession: NC_009049
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1064193 - 1064939 bp
Length : 747 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_2371 3-oxoacyl-(acyl-carrier protein) reductase / short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGACGAAGACGGCGGTTGTGACGGGGGCGGCGCGCGGGATCGGGCGCGCGCTCGCGGTGGGGCTCGCAGAGGCGGGCTA
CGATGTGGCGGTGACGGATCTGGCCGCGCAGGCCGAGGGGCTGGCCGAGACGCGCGCGCTGATCGAGGCCGCGGGCCGGC
GCGCCTTCGTCGAGACGGTGGATGTCTCGGACCGGGCCGCGGTCGTCGCCGCGATGGCGCGGATCGAGGAAGCCGCGGGC
GGGATCGACGTGCTGGTGAACAATGCGGGCATCCTGAAGCCCGCGCGGCTCGAGGATCTCTCGGAGGCCGACTGGGACGC
CCATATGGACGTGAACGTGAAGGGCGTCCTGTCCTGCTGTCAGGCGGTGCTGCCGGGGATGCGCGCGCGCAAGGCCGGGC
GGATCGTCAACATCGCCTCCATCGCGGGCCGTCAGGGCGTGCCGACGCAGGGCCATTATGCGGCGACCAAGGCCGCCGTC
ATTACCCTGACGCGGGTGCTGGCGCAGGAGGCCGGCATGGACGGGATCACCGTCAATGCCATCTGCCCGGGCATCATCCT
GACCGAGATGGGCAAGAACAACCTCGGCTCGGACGAGGCCATCCGCCACTGGGAAGAGGTGGCCGCGCTGAAGCGCCTCG
GCGCGCCCGAAGATATCGTGGGGCCGGTCCTGTTCTTCGCGGGCGAGCAGTCGGCCTTCGTCACCGGGCAGGCGCTGAAC
GTCTGCGGCGGGATCTACTTCCATTAG

Protein sequence :
MTKTAVVTGAARGIGRALAVGLAEAGYDVAVTDLAAQAEGLAETRALIEAAGRRAFVETVDVSDRAAVVAAMARIEEAAG
GIDVLVNNAGILKPARLEDLSEADWDAHMDVNVKGVLSCCQAVLPGMRARKAGRIVNIASIAGRQGVPTQGHYAATKAAV
ITLTRVLAQEAGMDGITVNAICPGIILTEMGKNNLGSDEAIRHWEEVAALKRLGAPEDIVGPVLFFAGEQSAFVTGQALN
VCGGIYFH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 8e-24 41