|
Name : Rsph17029_0001 (Rsph17029_0001) Accession : YP_001041893.1 Strain : Genome accession: NC_009049 Putative virulence/resistance : Virulence Product : FliI/YscN family ATPase Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : 3.6.3.15 Position : 36 - 1346 bp Length : 1311 bp Strand : + Note : KEGG: rsp:RSP_1332 H+-transporting two-sector ATPase, alpha/beta subunit; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: AAA ATPase DNA sequence : ATGTCGGGTGAATTTGACGGACTTCTGGCGGAGATCGCGGCGATCCCGCTGAGCCGCCGCTATGGGCGCGTGACCGGGAT CGGCCGGGGAACCTTATCCGTCGGAGGCCTCGAGCAGGGCACCGCGCTGGGCGACCGGGTGGAAATCTGCGGCGCGGGCG GCATCCTCGGCGGCGAGGTTCTGCGGCTTTCGGCGCACGAGGTGACGATCCTGCCCGACGGCAGCCCGGAAGGCCTCGCG ATCGGCGATGCGGTTGCTCTCGTCGGCCCCGCAGAGATCGCGCCGGACGACAGCTGGATCGGCCGGATCGTCGATCCGCT CGGCCGCCCGCTCGACGGGCGCCCGCTGTTTCGCGGCCCGCGAGCGCGTCCCTTGCGCGCGGCCGCGCCGGCGGCGGCGG CCCGCCGCAGCCTCGGGCCGCGGCTTCCCACCGGAGTTGCGGTCTTCGACACGCTGCTGCCTCTTGTCCAGGGGCAGCGG ATCGGGCTCTTCGCGGGGTCAGGGGTGGGGAAGTCCTCGCTTCTCGCCAAGTTCGCGCGGAGCGTCGTGGCCGACGTGGT GGTGATCGGGCTCGTGGGCGAGCGGGGTCGCGAGCTGCGCGATTTCACCGAGCGGGTGCTCGGGCCTGCGGGCATGGCGC GTGCGGTGGTGGTGACGGCCACCTCCGACCAGTCGCCGCTGGTTCGCCGTCGCTGCGGCTGGGCGGCCATGGCGGTGGCC GAGCATTTCCGCGACCAGGGGCTTCATGTGCTGCTCCTCGTCGATTCGATCACCCGTTTTGCCGAAGCTCATCGCGAGGT CGCGCTCGCGGGCGGCGAGGCGGCGAGCATGAGGGGCTTTCCCCCGTCGACAGCCCACACGATCATGGCCCTGGCCGAAC GCGCGGGACCGGGCGCTGAGGGCACAGGCGACATCACGGCTGTCTTCTCGGTTCTCGTGGCCGGGTCCGACATGGAGGAG CCGGTGGCAGATATTCTCCGCGGGGTGCTCGACGGCCATGTGGTGATGGATCGCAAGATCGCCGAGCGCGGACGCTTTCC GGCGATCGACCTGCTGCGATCCGTGTCGCGGGCCCTGCCTGAGGCCGCGAGCACGGCCGAAAATGCGCTGATCGCCGAGG CGCGTCGGCTGCTCGGGGCCTGGGACCGTGCCGAGATGATGATCCAGGCGGGGCTTTACGCCAGAGGATCCGATCCGCTC GTGGATGCGGCGATCCGGGTCTGGCCCGCGCTCGACGCCTTTCTGGCCGAGGATGCGCCGGACGGCATCGACGCCAGTTT CCGTCGCCTGGCCGACTGTCTCGGGCTCTGA Protein sequence : MSGEFDGLLAEIAAIPLSRRYGRVTGIGRGTLSVGGLEQGTALGDRVEICGAGGILGGEVLRLSAHEVTILPDGSPEGLA IGDAVALVGPAEIAPDDSWIGRIVDPLGRPLDGRPLFRGPRARPLRAAAPAAAARRSLGPRLPTGVAVFDTLLPLVQGQR IGLFAGSGVGKSSLLAKFARSVVADVVVIGLVGERGRELRDFTERVLGPAGMARAVVVTATSDQSPLVRRRCGWAAMAVA EHFRDQGLHVLLLVDSITRFAEAHREVALAGGEAASMRGFPPSTAHTIMALAERAGPGAEGTGDITAVFSVLVAGSDMEE PVADILRGVLDGHVVMDRKIAERGRFPAIDLLRSVSRALPEAASTAENALIAEARRLLGAWDRAEMMIQAGLYARGSDPL VDAAIRVWPALDAFLAEDAPDGIDASFRRLADCLGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 3e-58 | 42 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 3e-58 | 42 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 3e-57 | 41 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 7e-58 | 41 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 5e-57 | 41 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 3e-57 | 41 |
| hrcN | ABQ88354.1 | HrcN | Virulence | Hrp PAI | Protein | 6e-48 | 41 |
| hrpJ4 | AAA81942.1 | HrpJ4 | Virulence | Hrp PAI | Protein | 6e-48 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rsph17029_0001 | YP_001041893.1 | FliI/YscN family ATPase | VFG0390 | Protein | 3e-55 | 42 |
| Rsph17029_0001 | YP_001041893.1 | FliI/YscN family ATPase | VFG0192 | Protein | 5e-50 | 41 |
