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Name : Sbal_4425 (Sbal_4425) Accession : YP_001041729.1 Strain : Genome accession: NC_009036 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 41541 - 43664 bp Length : 2124 bp Strand : - Note : KEGG: psb:Psyr_1473 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protei DNA sequence : ATGAGACTCTTTTTATGCGAAAAACCGTCACAGGCAAAAGATATTGCGAGTGTCCTTGGTTGTAAGCGTGGAGATGGTGT TTTTACTGGTGACGGTATTGCGGTGACGTTTTGCGTTGGTCATGTTTTACAACAAGCAGAACCTGAAAACTATAACCCTG ATTTTGAGACGTGGAATATCGTTGATTTACCCATTATTCCAACAGTTTGGAAAATGTTAGTCAGTCCAAAAACGAAAGCG CAATTTGCGATTGTAAAAAAGCAATTGGCCAAGGCCACTGAGGTTATTATTGCAACGGATGCAGACCGCGAAGGTGAAGT TATCGCCCGTGAGGTGCTTGAATACGTTAACTATAAAGGGCCCATTCAACGGTTGTGGCTAAGTGCGTTGGATGACGCCA GCATTAAGAAAGCGTTGGCGTCTTTGCGACCTAACCATGAAACTGCCAAGCTTTACGATGCAGGGTTAGGCCGAAGTCGG GGAGACTGGCTTATTGGAATGAATATGACGCGATTATGCACCTTACTGAGCCGTGAATACGGTTATCAAGGTGCATTCTC AGTCGGAAGAGTGCAGACGCCAACATTACGGCTTGTGGTCGATAGAGATAGCCAAGTTGAGCAGTTTGAACCACAGTCGT ATTACGATATCACTGGCTTATTTAATGCAACGATCCCGTTTAAAGCCAAATGGCAAGTGCCTGATAATCTTGGGGATGAG CAAGGCCGCTGCTTACAAGTGACGACTGTTGATCATGTCTTGTCTCAATGTCGTGACCAACCTGGTACAGTCACGCAATT CGATACCAAGCGGCAAAAATCTAAACACCCACCGTTATTTTTCTTAGGTTCTTTGCAAAAGGCCATGTCTGCTAAGTTTG GCTATGGCGCTAAAGAAGTACTCGATATTGCGCAATCTTTATATGAGAAATATAAGGTCACGACTTACCCCCGAACAGAT TGTCCTTATTTGCCCTTATCTCAGAAGGAGGAGGTTGGCTCAATCCTCGATAAACTCAAGGTTGTGCCAGCATTTGCTGC ATGGTGTAGCGCTGCAGATGTAAATGAAACAAGTGCCTGTTGGAATGATAAGAAAATTACGGCTCACCACGGGATTATTC CATTACCGGTGACACCGAAATTGCATGAAATGAACGAAAAGGAGCTGAATCTTTATCATGCTATTGTGCAGCGATATCTC GCTCAGTTTTACCCAGTAGCGGAAGACGATGCCACAACAATTGAACTGATGGTTGGAAGCCAAAGTGTTAAAGCGACGGG CAAGGTTGAGCGAGTGAAAGGCTGGCGCTTGGTGACAGGTAAAGACAGTGAGGATGAAACTACCGATGACAGTGCTAATT TGCCGCTGTTGAGCATCGGACAAACCTTAACAGCACAGTTTCAGCGAGAAGATAAGCGAACAAAGCCACCTGGACGTTTT ACGGAAGGAACGCTGATTGATGCAATGTCAAATATCGCTAAATTTGAAAGTGATCCCAAACTCAAATCCATTTTAAAAGA AACCTCAGGCATTGGTACTGAAGCAACCCGAGCAAACATTATCGATACGCTCAAAGCGCGGGGATTTGTCACTGTTACGG GGAAGCAGTTGATAAGCTCAGAAGCCGGAAGATCACTCATCGATGCGTTGCCAGATGTGCTCACCAGACCCGCTATGACA GCATTGTGGGAACAAGCACTCGATGAGATTGCATTGGGTAATGGTTCACTGGATGATTTCATGGCAAGGCAAAGTACATT TATCACGCAATTAGTCTCTATGTTCAAACAAGGGCAATACACATTAAAGCTGCCAAAGGTTTTGGCTGTGACACTCCCGT GCCCAGTATGTCAAAAATCGATGAAACAATTGTCGGGGAAAAACGGTAAGTTCTGGGTATGCGAGGACAAAGAACAATGT GGTCTATTGCTTAATGATGAGCGCGGGAAATTGCCTAAAACAACACCTTGTACATGTAAGAAAGGGGTGCTTGTTAGAAA AAAAGCCAAAACGAAAGGTAAGTTCTGGTGGGGATGCTCGGCATATCAATCAGGTTGCCAGCGACGATTGTTTGATAATG AGGGTAAGCCTGGTAAGGAGATGGAGAGCAATAACCAAACATAG Protein sequence : MRLFLCEKPSQAKDIASVLGCKRGDGVFTGDGIAVTFCVGHVLQQAEPENYNPDFETWNIVDLPIIPTVWKMLVSPKTKA QFAIVKKQLAKATEVIIATDADREGEVIAREVLEYVNYKGPIQRLWLSALDDASIKKALASLRPNHETAKLYDAGLGRSR GDWLIGMNMTRLCTLLSREYGYQGAFSVGRVQTPTLRLVVDRDSQVEQFEPQSYYDITGLFNATIPFKAKWQVPDNLGDE QGRCLQVTTVDHVLSQCRDQPGTVTQFDTKRQKSKHPPLFFLGSLQKAMSAKFGYGAKEVLDIAQSLYEKYKVTTYPRTD CPYLPLSQKEEVGSILDKLKVVPAFAAWCSAADVNETSACWNDKKITAHHGIIPLPVTPKLHEMNEKELNLYHAIVQRYL AQFYPVAEDDATTIELMVGSQSVKATGKVERVKGWRLVTGKDSEDETTDDSANLPLLSIGQTLTAQFQREDKRTKPPGRF TEGTLIDAMSNIAKFESDPKLKSILKETSGIGTEATRANIIDTLKARGFVTVTGKQLISSEAGRSLIDALPDVLTRPAMT ALWEQALDEIALGNGSLDDFMARQSTFITQLVSMFKQGQYTLKLPKVLAVTLPCPVCQKSMKQLSGKNGKFWVCEDKEQC GLLLNDERGKLPKTTPCTCKKGVLVRKKAKTKGKFWWGCSAYQSGCQRRLFDNEGKPGKEMESNNQT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 2e-134 | 49 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 6e-136 | 48 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 3e-134 | 47 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-134 | 47 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-134 | 47 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 9e-138 | 46 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 4e-129 | 45 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 9e-132 | 45 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 3e-117 | 42 |
