Gene Information

Name : Smar_1403 (Smar_1403)
Accession : YP_001041402.1
Strain : Staphylothermus marinus F1
Genome accession: NC_009033
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1373505 - 1374236 bp
Length : 732 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0731 ATPase

DNA sequence : 
ATGGCGGAGGATATCGTAATAAAAGTTGTTGATCTCCATAAATATTATATATTGAAGGGAGAAACTGTAAAAGCTCTTCA
GGGAATAAATCTCGAGATCTATAGGGGCGAATACGTATCAATACTTGGTCCTAGTGGTAGTGGTAAAACAACATTATTCA
ACATGATCGGAGGACTAGATAAACCTACATCAGGCAAAGTATATGTTGATGGAGTAGACATTTATTCTTTGCCAAAGAAG
AAACTGGCATATTTTAGAAATAAAAAGCTAGGCTATGTGTTTCAAACATATAATCTCATACCATATTTAACTGCATTAGA
TAATGTAGCATTGCCCATGGTATTTGCAGGTGTTCCGAGAAGAAAACGTGTTGAGAAAGCACGTAAGCTTTTAGAAGCAG
TTGGTCTTGGAGAAAGACTTTATCATAGACCCTTTGAGCTCAGCGGAGGTCAGCAACAGAGAGTGGCTATTGCTAGAGCA
TTAGCTAACGATCCATCAATAATACTAGCAGATGAGCCAACAGCTAACTTAGATCTAGTTACGGGTAAGCAGGTTATTAA
TTTATTGAAAGATATAAGCTTAACACGTAACGTTACAGTTGTCACTAACACTCATGATCTAAAAATGATTGATGTAAGTG
ATCGAATAGTTTATATTAGAGATGGAAAAATTGAGAGAATAGAGGAGAGACAAACAGCTGAGATAAGAGATATAATTATT
GATATAGGCTAG

Protein sequence : 
MAEDIVIKVVDLHKYYILKGETVKALQGINLEIYRGEYVSILGPSGSGKTTLFNMIGGLDKPTSGKVYVDGVDIYSLPKK
KLAYFRNKKLGYVFQTYNLIPYLTALDNVALPMVFAGVPRRKRVEKARKLLEAVGLGERLYHRPFELSGGQQQRVAIARA
LANDPSIILADEPTANLDLVTGKQVINLLKDISLTRNVTVVTNTHDLKMIDVSDRIVYIRDGKIERIEERQTAEIRDIII
DIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Smar_1403 YP_001041402.1 ABC transporter NC_012469.1.7686878. Protein 4e-41 48
Smar_1403 YP_001041402.1 ABC transporter CP001581.1.gene798.p Protein 4e-39 46
Smar_1403 YP_001041402.1 ABC transporter CP001581.1.gene598.p Protein 1e-41 45
Smar_1403 YP_001041402.1 ABC transporter NC_008702.1.4606598. Protein 1e-35 43