Gene Information

Name : Cthe_0801 (Cthe_0801)
Accession : YP_001037229.1
Strain : Clostridium thermocellum ATCC 27405
Genome accession: NC_009012
Putative virulence/resistance : Unknown
Product : transposase, mutator type
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 968387 - 969610 bp
Length : 1224 bp
Strand : -
Note : PFAM: transposase, mutator type; KEGG: det:DET1301 ISDet4, transposase

DNA sequence :
ATGGCAAGAAAAAGGATAATAACACCAGAAAAGAAAGAGCTTATCAGAAATCTCATTTCTGAGTACAACATTACTTCAGC
AAAGGATTTGCAGGAAGCATTGAAGGATCTGCTCGGAGATACGATACAAAATATGTTGGAAGCAGAGCTGGATGAACATC
TCGGATATGAAAAGTACGAATCAACTGAAGAAGCGAAATCAAATTACCGTAACGGGTACACATCAAAAACATTAAAGTCA
AGTGTAGGGCAAGTAGAAATAGATATCCCGCGGGACCGGAATGCAGAATTCGAGCCGAAAATTGTTCCCAAGTATAAAAG
GGACATTTCAGAAATTGAAAATAAAATAATAGCAATGTATGCGCGGGGGATGTCTACCAGAGAAATCAATGAGCAGATAC
AGGAAATCTACGGATTTGAAGTATCTGCCGAGATGGTAAGTAAGATCACTGATAAAATACTACCTCAGATAGAAGAGTGG
CAGAAAAGGCCTCTGGGAGAGGTTTATCCGATAGTATTTATTGACGCAATTCATTTTTCAGTAAAAAATGACGGCATTGT
TTCGAAGAAGGCCGTATATATTGTGCTGGCAATTGATATAGAAGGGCAGAAAGATGTTATCGGTATTTATGTAGGAGAAA
ATGAGAGCTCAAAATTCTGGCTGAGTGTCTTAAAAGACCTTAAAAACAGAGGAGTTAAAGACATCCTGATTCTCTGTGCT
GATGCACTTTCAGGGATAAAGGATGCAATCAATGCGGCTTTTCCGAATACTGAATATCAGAGGTGTATAGTACACCAGAT
AAGAAACACGCTAAAGTATGTGTCAGATAAAGGCCGAAAGGAATTTGCCAGGGACTTGAAACGGATATATACGGCTCCGA
ATGAGAAGGCAGGGTACGACCAGATGCTTGAGGTTTCAGAGAAATGGGAGAAGAAATACCCGGCAGCTATGAAGAGCTGG
AAGAGCAATTGGGATGTTATTTGTCCATTTTTTAAGTATTCGGAGGAACTACGTAAAATCATGTATACGACCAATACTAT
TGAGAGCCTGAATAGCAGTTATAGAAGGATAAACAAATCAAGGACAGTATTTCCTGGCGACCAGTCACTTTTAAAGAGCA
TATATTTAGCTACAGTAAAGATTACTTCAAAATGGACGATGCGTTACAAAAACTGGGGTTTGATACTGGGACAGCTACAG
ATTATGTTCGAAGGGCGTATATAG

Protein sequence :
MARKRIITPEKKELIRNLISEYNITSAKDLQEALKDLLGDTIQNMLEAELDEHLGYEKYESTEEAKSNYRNGYTSKTLKS
SVGQVEIDIPRDRNAEFEPKIVPKYKRDISEIENKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPQIEEW
QKRPLGEVYPIVFIDAIHFSVKNDGIVSKKAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLKDLKNRGVKDILILCA
DALSGIKDAINAAFPNTEYQRCIVHQIRNTLKYVSDKGRKEFARDLKRIYTAPNEKAGYDQMLEVSEKWEKKYPAAMKSW
KSNWDVICPFFKYSEELRKIMYTTNTIESLNSSYRRINKSRTVFPGDQSLLKSIYLATVKITSKWTMRYKNWGLILGQLQ
IMFEGRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 3e-98 53
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 2e-87 46