|
Name : Cthe_0594 (Cthe_0594) Accession : YP_001037022.1 Strain : Clostridium thermocellum ATCC 27405 Genome accession: NC_009012 Putative virulence/resistance : Unknown Product : transposase, mutator type Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 730556 - 731776 bp Length : 1221 bp Strand : + Note : PFAM: transposase, mutator type; KEGG: sth:STH2289 transposase DNA sequence : GTGGCTACTAATAATAGAATGGCACTTTTAGAACAACTTAGCAAGTATGTTGTTGAAAAAGATAAAGATTTTTTAAAAGA AGCATTAACATTACTCATTAATGCCCTAATGGATGCGGAAGTTACATCAATAATAGGTGCTGAAAAGTATGAAAGAAATA ATAATAGAAACAACTATCGCAATGGATATCGTCTAAGAGAATGGGATACTCGAGTAGGAACATTACAGTTAAGCATTCCC AAGTTACGTCACGGAAGTTATTTTCCAAGTCTTTTAGAACCGAGGAAAATGTCAGAGAAAGCATTATTGAATGTAGTTCA GGAAGCCTATGTTCATGGAGTAAGTACCAGGAAGGTGGATGAACTTGTAGAAGCTCTTGGAATGAAAGGGATTGATAAAA GCGAAGTATCAAGAATCAGTAAGCAACTGGATGAATTTGTAGAAGAATTTAAAAACCGTAGACTGGAAGGAGAATATCCT TACCTTTGGCTTGATGCCACTTTCCCCAAGGTTCGGGAAGGAGGCAGGGTATGCAGTATGGCACTAGTTATAGCAGTAGG AGTTAATCAACAAGGTGAACGGGAAATATTAGGTTTTGATGTAGGGATGAGTGAAGACGGGGCTTTTTGGGAGGAGTTTT TAAGAAGGCTGGTAGCAAGGGGTCTAAAAGGTGTAAGGCTTGTAATCAGTGATGCACATGAAGGGCTGAAGGCTGCAATA AAGAAGATTTTAACGGGAAGTGCATGGCAAAGATGCCGTGTACATTTTATGAGAAACGTATTAAGCCAGGTACCAAAGCA TTATCAGGGAATGGTATCATCGATAATACGGACAATATTTGCCCAGAATGATCAGGAATCTGCGAGGGAACAGTTAAGGC ATGTAGTAGATGAGCTTAAAAATCGTTTTCCAAAAGCAATGAAAATTCTTGAAGAAGCAGAAGAAGAAATCCTGGCATAT ATGGCTTTTCCCCGTGAGCATTGGGCACAGATACACTCCACCAATCCTCTTGAGAGACTTAACCGGGAAATTCGCCGTCG AACGGATGTTGTTTGCATATTTCCAAATCGTGAGGCGGTAATCCGATTGGTAGGAGCAATGCTCATGGAACAAAATGATG AATGGAAAGTAGGGCGGCGCTATTTCAGTCTGGAATCAATGTCAAAGATTACATCGATAAATGAATTTACATTGACACCA GTAGCTTTATTACATAAATGA Protein sequence : MATNNRMALLEQLSKYVVEKDKDFLKEALTLLINALMDAEVTSIIGAEKYERNNNRNNYRNGYRLREWDTRVGTLQLSIP KLRHGSYFPSLLEPRKMSEKALLNVVQEAYVHGVSTRKVDELVEALGMKGIDKSEVSRISKQLDEFVEEFKNRRLEGEYP YLWLDATFPKVREGGRVCSMALVIAVGVNQQGEREILGFDVGMSEDGAFWEEFLRRLVARGLKGVRLVISDAHEGLKAAI KKILTGSAWQRCRVHFMRNVLSQVPKHYQGMVSSIIRTIFAQNDQESAREQLRHVVDELKNRFPKAMKILEEAEEEILAY MAFPREHWAQIHSTNPLERLNREIRRRTDVVCIFPNREAVIRLVGAMLMEQNDEWKVGRRYFSLESMSKITSINEFTLTP VALLHK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp7109-24 | YP_001800852.1 | transposase for insertion sequence | Not tested | Not named | Protein | 2e-53 | 45 |
| IS256 | BAC22941.1 | IS256 transposase | Not tested | etd PI | Protein | 3e-53 | 41 |
| unnamed | BAC67572.1 | transposase for insertion sequence element IS256 in transposon Tn4001 | Not tested | Type-IVc SCCmec | Protein | 3e-53 | 41 |
| unnamed | BAC67574.1 | transposase for insertion sequence element IS256 in transposon Tn4001 | Not tested | Type-IVc SCCmec | Protein | 3e-53 | 41 |
| EF0529 | NP_814305.1 | IS256, transposase | Not tested | Not named | Protein | 4e-53 | 41 |
| SERP1584 | YP_189149.1 | IS256-like transposase | Not tested | ¥ÕSP¥â | Protein | 4e-53 | 41 |
| SERP1587 | YP_189152.1 | IS256-like transposase | Not tested | ¥ÕSP¥â | Protein | 4e-53 | 41 |
