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Name : Cthe_0534 (Cthe_0534) Accession : YP_001036963.1 Strain : Clostridium thermocellum ATCC 27405 Genome accession: NC_009012 Putative virulence/resistance : Virulence Product : bacteriocin-processing peptidase Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 651489 - 653672 bp Length : 2184 bp Strand : + Note : KEGG: ABC ATPase containing transporter; TIGRFAM: ABC-type bacteriocin transporter; PFAM: ABC transporter, transmembrane region; ABC transporter related; peptidase C39, bacteriocin processing; SMART: ATPase DNA sequence : ATGCTCAGGCGTTTGTTCAAAAAAAAGTATGTATGCGTAAGGCAATATGATTTGACAGACTGTGGAGCAGCCTGTTTGTC CAGTATTGCCCAATATTACGGGTTAAAAATGTCCCTTGCAAAGATACGTGAGATGACAGGCACCGATACCCAGGGCACAA ATGCCTATGGTTTAATTCATGCTGCAAAGCAACTGGGGTTTTCAGCAAAAGGTGTTAAGGCCTCAAAAGAGGATTTGCTG AAAGATTTTAGGCTTCCAGCCATAGCAAATGTAATTGTTGACAACAGGCTTGCTCATTTTGTAGTGATTTATTCAATTAA AAACAGGATAATTACGGTTGCCGACCCTGGCAAGGGAATTGTCAGGTATAGTATGGATGATTTTTGTTCAATTTGGACCG GTGGGCTTGTTTTGCTGGAGCCCGGCGAAGCTTTCCAAAAAGGGGATTATACCCAAAATATGATGGTGAAATTTGCAGGT TTTTTGAAGCCTTTAAAAAAAACCGTACTGTGTATATTTTTAGCTTCGCTTTTATATACTGCTTTAGGAATTGCAGGCTC CTTTTATATCAAGTTTTTGTTTGACGACCTTATAAAATTTGAAAAGCTTAACGACCTTCATATAATTTCCGCAGGATTTG CTGTTATATTTTTACTTCAGATATTTCTTAATTATTACAGAAGCATACTTGTTACCAAACTTGGAATGAGCATTGACAAG TCCATAATGATGGAGTATTACTCCCATGTGTTAAAGCTTCCCATGAATTTTTTCAATTCCAGAAAAGTTGGGGAGATAAT TTCAAGATTTATGGATGCTTCAAAAATACGACAGGCAATTTCCGGAGCAACCCTTACCATAATGATTGATACAATTATGG CCGTTATCGGAGGAATTCTTTTATATATACAAAACTCTTCCCTGTTCTTTATATCTTTTATCATCATATTGCTGTACGGA ATAATTGTGACGGTGTTTAACAAACCGATTCAGAATGCTAACAGGCAAATAATGGAGGATAATGCAAAATTAACTTCGGC GCTGGTGGAGTCGGTTAAAGGGATTGAGACGATAAAATCCTTTGGTGCCGAGGAACAGACCGAAAAAAGCACCAGAGACA AAATTGAAACTGTAATGAAAAGCTCTTTTAAAGAAGGGATGCTGTACATAAATCTTTCTTCCCTGACCGGTATTGTTGCC GGGCTTGGAGGTATTGTAATACTCTGGGCCGGTGCATACAATGTCATAAAGGGAAACATGAGCGGGGGACAGCTTCTTGC TTTTAATGCACTGTTGGCATATTTTCTCACACCTGTGAAAAACTTAATTGATCTTCAGCCGCTTATACAAACGGCGGTGG TAGCCTCCAACAGGCTTGGAGAGATACTTGAACTTGCCACTGAAAAGGAACTGAGAGAAGACAGTGATGATTTTGTCATA TCATTAAAAGGAGACATTGAATTTAGGAATGTGGATTTTCGCTACGGATTAAGAAAGCCTGTGCTAAAAAACATTAATTT AACCATACCAAAAGGGAAAACGGTAGCCATAGTAGGTGAGAGTGGTTCCGGGAAAACTACTCTGGCAAAGCTTTTGATGA ATTTTTACAGTCCGGAAAAAGGGGACATTTTGATAAACGGACACAGTATAAAAAATATAAGTTTGGAGTTGATTAGAAAG AAAATAGCTTTTGTTTCACAGGATGTCTTTATTTTCAGTGGTACTGTAAAAGAAAATCTTTGTCTTGGCAATGAAAATGT TGATATGGATGAGATTATAAAAGCGGCTAAAATGGCAAATGCCCATGATTTTATAGAAAAACTGCCCCTAAAATATGATA CTTTTTTGAATGAAAGCGGAGCAAATCTTTCCGAAGGGCAAAAACAAAGGCTGGCGATAGCAAGGGCACTGCTTAAAAAA CCGGATATTTTGATACTCGACGAGGCAACAAGCAATTTGGACAGCATCACCGAAAACCATATCAAGGATGCAATATACGG TTTGGAAGATGATGTAACGGTTATTATAATAGCCCACAGGCTGAGCACAATAGTAAACTGTGACAAAATATATCTGCTAA AAGACGGTGAGATAGTGGAGAGTGGCTCTCACACCGAGCTTATAGCGTTAAAAGGTTGTTATTTTAAGATGTGGAAACAG ACAGAAAACACTTTGGCTTCGTAA Protein sequence : MLRRLFKKKYVCVRQYDLTDCGAACLSSIAQYYGLKMSLAKIREMTGTDTQGTNAYGLIHAAKQLGFSAKGVKASKEDLL KDFRLPAIANVIVDNRLAHFVVIYSIKNRIITVADPGKGIVRYSMDDFCSIWTGGLVLLEPGEAFQKGDYTQNMMVKFAG FLKPLKKTVLCIFLASLLYTALGIAGSFYIKFLFDDLIKFEKLNDLHIISAGFAVIFLLQIFLNYYRSILVTKLGMSIDK SIMMEYYSHVLKLPMNFFNSRKVGEIISRFMDASKIRQAISGATLTIMIDTIMAVIGGILLYIQNSSLFFISFIIILLYG IIVTVFNKPIQNANRQIMEDNAKLTSALVESVKGIETIKSFGAEEQTEKSTRDKIETVMKSSFKEGMLYINLSSLTGIVA GLGGIVILWAGAYNVIKGNMSGGQLLAFNALLAYFLTPVKNLIDLQPLIQTAVVASNRLGEILELATEKELREDSDDFVI SLKGDIEFRNVDFRYGLRKPVLKNINLTIPKGKTVAIVGESGSGKTTLAKLLMNFYSPEKGDILINGHSIKNISLELIRK KIAFVSQDVFIFSGTVKENLCLGNENVDMDEIIKAAKMANAHDFIEKLPLKYDTFLNESGANLSEGQKQRLAIARALLKK PDILILDEATSNLDSITENHIKDAIYGLEDDVTVIIIAHRLSTIVNCDKIYLLKDGEIVESGSHTELIALKGCYFKMWKQ TENTLAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_1082 | YP_698404.1 | bacteriocin ABC transporter ATP-binding/permease | Virulence | Not named | Protein | 3e-168 | 54 |
| CPR_0658 | YP_697985.1 | lactococcin g processing and transport ATP-binding protein | Virulence | Not named | Protein | 1e-119 | 42 |
