Gene Information

Name : Cthe_0384 (Cthe_0384)
Accession : YP_001036815.1
Strain : Clostridium thermocellum ATCC 27405
Genome accession: NC_009012
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 478779 - 479492 bp
Length : 714 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: ATPase; KEGG: bat:BAS2837 ABC transporter, ATP-binding protein

DNA sequence : 
ATGAAAAACGCAATTATAAGATTGGAGAATATCAGTAAAATATACGGAAAAGACGATTATAAGACAGTTGCTTTAAAAGA
TATAAATTTAGAAATTTTCGAAGGGGATTTCGTGTCAATAATGGGGCCGTCAGGTTCCGGCAAAACAACGCTGCTGAATA
TAATCGGCTTCATAGATACGCCGACCGACGGTAAGTATTTTCTTAAAGGGCAGGATGTAAACAAAATGGCCAGGGGCAAG
TTTCACAAATTAAGAGGCACCGAAGTGAGTTTTATATTCCAGCAGTTTGCCCTTCTTAAAGACTATACGGCATATGAAAA
CATTCAGCTGCCGCTTTTATATAGAAAAATGTCAAGAAAAGAGAAAAAAGCAAAAATACTTTTTTATGCCGAAAAACTTG
GTATAGGTGATATTTTGCACAAAAAACCGTCTCAGTTATCAGGGGGGCAACAGCAAAGGGTGGCTATTGCCAGGGCACTG
GCAAGTGAAGCCAACATTATCCTTGCGGATGAACCTACCGGAGCATTGGATCAGAAAAAAGGAAACGAGCTTATGAAGAT
ACTTGCCGGTTTAAATAAAGAGGGGAAAACGATTTTGGTAGTAACTCACGATCCAAACATTGCAAATTATTGTATCAGAA
ACATTCGTATTGAAGACGGTAAGATAATAAGTGACAGTTCGAGTTTACAGGATGAACCGTTAAAAACTTGTTAG

Protein sequence : 
MKNAIIRLENISKIYGKDDYKTVALKDINLEIFEGDFVSIMGPSGSGKTTLLNIIGFIDTPTDGKYFLKGQDVNKMARGK
FHKLRGTEVSFIFQQFALLKDYTAYENIQLPLLYRKMSRKEKKAKILFYAEKLGIGDILHKKPSQLSGGQQQRVAIARAL
ASEANIILADEPTGALDQKKGNELMKILAGLNKEGKTILVVTHDPNIANYCIRNIRIEDGKIISDSSSLQDEPLKTC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-34 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cthe_0384 YP_001036815.1 ABC transporter-like protein NC_012469.1.7686878. Protein 7e-53 52
Cthe_0384 YP_001036815.1 ABC transporter-like protein NC_012469.1.7686946. Protein 1e-30 42
Cthe_0384 YP_001036815.1 ABC transporter-like protein NC_008702.1.4606598. Protein 6e-37 42
Cthe_0384 YP_001036815.1 ABC transporter-like protein CP001581.1.gene598.p Protein 7e-34 41