|
Name : Cthe_3208 (Cthe_3208) Accession : YP_001039596.1 Strain : Clostridium thermocellum ATCC 27405 Genome accession: NC_009012 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 3800183 - 3801253 bp Length : 1071 bp Strand : - Note : PFAM: Integrase, catalytic region; KEGG: tte:TTE0879 transposase, IS30 family DNA sequence : ATGGCTGTACAATATAAGTCTACCACAACTGAGCATAAGTTTAAACACTTAAGTGTTTATGAAAGAGGGCAGATTGCAGC TCTTTTAAAAGAAGGAAAGAGTCAACGTTATATTGCTAATAAACTAGGTCGCTCGCCAAGTACAATTAGCCGTGAAATTA AAAGAGGGACAACAATGCAGATGAGAACTGATTTATCGACATACAAAGTATATTTTCCTGAAACAGGGCAGGCAGTTTAT GAGAAAAATCGTATGAATTGCGGAGCAAAGCGTAAATTGGCTCAAGTTGAAGATTTTCTTAAGTTTGCAGAAGATAAGAT ACTACGCGAAAAATGGTCTCCAGATGCAGTTGTTGGTTTATGTAGGAGAGACCCCAAGTGGCAAAATTCTACTATTGTAT GTACCAAAACACTGTATAATTATATAGACCTGGGACTCATAAAAGTACGAAATATAGATTTAAATCTTAAACTACGTTTA AAATCTAAAATAAAAAGGATACGTCAAAACAAACGGGTTGTAGGGAAAAGCATTGATCAAAGGCCGGAAGAAGTACAATC ACGTCAAACCTTTGGGCATTGGGAAATTGATACGGTAACAGGCAAAAAGTCTAACGATTCAGTAATTTTAACCTTAACTG AACGAAAAACCCGCTACGAGTTATTGTTTCTTTTGGACGCAAAAGACAGTAATACTGTTAACGAGGCACTTTCAGAACTT AAGAATTGTTATGGTAAGGATGTTTCAAATGTATTTCGCACTATAACGGCAGACAATGGTTCTGAATTTAGTAGACTATC CGAAATGTTACAAGGGCTAGGAATTGAAGTTTATTTCACTCATCCTTATTCCTCATGGGAGAGAGGAACTAATGAACGTC ATAATGGACTTATTAGGCGTTTTATTCCTAAAGGAAAGGCTATAAAAGATTTTTCTGAAGAAACGATAAAACGGATACAA CAATGGTTAAACAGCCTTCCACGAAGGATATTAGGTTACAAAACACCTGAAGAATGTTTTAATGAAGAGATACATAACCT GGTAAACAAAAATATATCAGCAATAGCCTGA Protein sequence : MAVQYKSTTTEHKFKHLSVYERGQIAALLKEGKSQRYIANKLGRSPSTISREIKRGTTMQMRTDLSTYKVYFPETGQAVY EKNRMNCGAKRKLAQVEDFLKFAEDKILREKWSPDAVVGLCRRDPKWQNSTIVCTKTLYNYIDLGLIKVRNIDLNLKLRL KSKIKRIRQNKRVVGKSIDQRPEEVQSRQTFGHWEIDTVTGKKSNDSVILTLTERKTRYELLFLLDAKDSNTVNEALSEL KNCYGKDVSNVFRTITADNGSEFSRLSEMLQGLGIEVYFTHPYSSWERGTNERHNGLIRRFIPKGKAIKDFSEETIKRIQ QWLNSLPRRILGYKTPEECFNEEIHNLVNKNISAIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0379 | YP_697708.1 | IS1470, transposase | Not tested | Not named | Protein | 6e-71 | 50 |
| CPR_0383 | YP_697712.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-70 | 50 |
| CPR_0628 | YP_697955.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-70 | 50 |
| CPR_0967 | YP_698290.1 | IS1470, transposase | Not tested | Not named | Protein | 8e-71 | 49 |
| CPR_1088 | YP_698410.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-69 | 49 |
| CPR_0648 | YP_697974.1 | IS1470, transposase | Not tested | Not named | Protein | 8e-70 | 49 |
| CPR_0321 | YP_697650.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-70 | 49 |
| CPR_1078 | YP_698400.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-70 | 49 |
| CPR_0314 | YP_697643.1 | IS1470, transposase | Not tested | Not named | Protein | 8e-71 | 49 |
| CPR_0659 | YP_697986.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-45 | 46 |
