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Name : Cthe_3182 (Cthe_3182) Accession : YP_001039570.1 Strain : Clostridium thermocellum ATCC 27405 Genome accession: NC_009012 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 3760867 - 3761979 bp Length : 1113 bp Strand : + Note : PFAM: Integrase, catalytic region; KEGG: tde:TDE1752 ISTde2, transposase DNA sequence : ATGGTAATCCATTGTAAAATGTTTAATAACCAAAGAAAAACATTAGCAAAGGAGTACCATGAGTTATATATGAATAATAA CACAGAAACAAGAAAAAACAAACACCTAAATGAAAGAGAAAGATACGCCATAGAGTTGTACCTAAAAGAAAAGTATACAG TAACGGAAATAGCAAAGAGGTTGGGCAGGCACAGAAGGACAATAGAAAGAGAAATAACCCGTGGGACAATATATTTACAA AATAGTGATTTAACATACAGAAAAGAGTATTGTGCAGATGTAGCCCAAAGGAGATATGTAGAGAACGGGAAGAATAAAGG TCCACGGTTAAAGATAGGAAATGACCATGAATTAGTGAGGTATATAGAATCAAAGATAATAAATGAAAAATATTCTCCTG ATGCTGTTATTGGACAAATAAAAGCAAAGGGACTGAAGTTTAAAACGAGTATCTGCACGAAAACACTATATAACTACATT GATAGAGGGGATGTATTTTTAAGACTAACGAATAAATATTTGCCAGTGAAAAAGGATGGTAAAAAACGCATATATCAAAG GGTAAAGAAGATAGCACTGAAAAATCTTAAGGGAAGCAGCATAGAGGAAAGGCCGAAAGAAGTTAACGATAGGAAGGAAT ATGGACACTGGGAGATGGACTGTGTAGTAGGCAGAAAAAATAGCGCAGCAGTATTACTGGTATTAAGTGAACGAAAGACA AGAGAAGAAATAATTCTTAAACTACCAGACAAAACGCAGGAATCAGTAATCAAAGCAATAGATGAATTAGAAAGGAAGTA TAGAAGGAAATTTAGGGAGAAGTTTAAAACGATAACAGTAGATAACGGGACAGAGTTTTTGGACTATAGAGGGATAGAGA AATCAAAAACAGAGCCAGGCAAGGACAGGACGAAAGTGTATTATGCTCATCCTTATAGTTCTTGGGAAAGAGGAACGAAC GAAAATATTAATAAACTGATAAGAAGATTTATACCAAAAGGAACAGATATATCAAAAGTAAGTAAAGCAAAAATAAAAAG TATAGAGAGATGGATTAATGAATATCCAAGAAGAATGTTTGGTTATAGGTCAGCCATAGAAATGGCGGTATGA Protein sequence : MVIHCKMFNNQRKTLAKEYHELYMNNNTETRKNKHLNERERYAIELYLKEKYTVTEIAKRLGRHRRTIEREITRGTIYLQ NSDLTYRKEYCADVAQRRYVENGKNKGPRLKIGNDHELVRYIESKIINEKYSPDAVIGQIKAKGLKFKTSICTKTLYNYI DRGDVFLRLTNKYLPVKKDGKKRIYQRVKKIALKNLKGSSIEERPKEVNDRKEYGHWEMDCVVGRKNSAAVLLVLSERKT REEIILKLPDKTQESVIKAIDELERKYRRKFREKFKTITVDNGTEFLDYRGIEKSKTEPGKDRTKVYYAHPYSSWERGTN ENINKLIRRFIPKGTDISKVSKAKIKSIERWINEYPRRMFGYRSAIEMAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0648 | YP_697974.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-37 | 42 |
| CPR_0314 | YP_697643.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-38 | 42 |
| CPR_0967 | YP_698290.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-38 | 42 |
| CPR_1088 | YP_698410.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-37 | 42 |
| CPR_0383 | YP_697712.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-37 | 42 |
| CPR_0628 | YP_697955.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-37 | 42 |
| CPR_0379 | YP_697708.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-37 | 42 |
| CPR_0321 | YP_697650.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-37 | 42 |
| CPR_1078 | YP_698400.1 | IS1470, transposase | Not tested | Not named | Protein | 5e-38 | 42 |
