|
Name : Cthe_3120 (Cthe_3120) Accession : YP_001039508.1 Strain : Clostridium thermocellum ATCC 27405 Genome accession: NC_009012 Putative virulence/resistance : Virulence Product : pyruvate flavodoxin/ferredoxin oxidoreductase-like protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : - Position : 3680605 - 3684141 bp Length : 3537 bp Strand : + Note : PFAM: 4Fe-4S ferredoxin, iron-sulfur binding; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase-like; KEGG: ctc:CTC01159 pyruvate-flavodoxin oxidoreductase DNA sequence : GTGAAGAAAGTGCAGAAATTTGAAACAATGGATGGAAATCAGGCGGCTGCGTATGCATCTTACGCTTTTACGGATGTTGC AACAATATATCCGATAACGCCGTCATCGCCCATGGCGGAAACTGTGGATGAATGGGCAGCCCATGGAAAGAAAAACATTT TCGGACAGCCGGTCAGAGTTGTGCAGATGCAGTCCGAGGCAGGTGCCGCCGGTGCAATGCACGGTTCTCTTGCGGCAGGG GCATTGACGACCACTTATACTGCTTCCCAGGGGCTTTTGCTGATGATCCCGAACCTGTACAAAATGGCGGGAGAGCTTTT GCCCGGAGTATTGCATGTTTCGGCGAGAGCAATTGCAACCCATGCTTTGTCCATATTTGGCGACCACCAGGATGTAATGG CTTGTCGTCAGACCGGAGTTGCACTCCTTGCATCATCCAATGTTCAGGAAGCGGCAGACTTGGGATATGTTGCGCATCTT TCGGCCATTAAATCCCGGGTTCCGTTTATCCATTTCTTTGACGGTTTCAGAACTTCCCATGAATATCAGAAGATTGGACT GATTGAATACGATGAACTTGCAAAGCTTGTCGACCATAATGCAATAAAAGAATTCAGGGACAGGGCTTTAAATCCTGAAC ATCCTGTTGCCAGAGGAACGGCGCAAAATCCGGATATTTATTTCCAGGGAAGAGAAGTACAGAATAAATTCTATGACAAC GTTCCCGATATTGTTGCAGGCTATATGCAGGAAATAAAAAGGATTACAGGCCGCGAATACCGCCCGTTTGATTATTACGG GGCAAAAGATGCGGAATATGTGATTGTGGCAATGGGTTCCGTTTGCGATACCATTGATGAAACCATTGACTACCTTATGG CGAAGGGAGAAAAGGTAGGTTCTGTAAGAGTACACCTTTACAGGCCTTTCTCCGAAAAGTACTTCTTTGACGTAATTCCA AAAACGGTGAAGAAAATTGCAGTGCTTGACAGGACTAAAGAACCCGGAGCACCGGGAGAGCCTTTGTACCTTGATGTTTC AAAAATGTATCTGTCAAAAGAAAACAGGCCGGTTATCGTAGGCGGAAGATATGGACTCGGTTCGAAGGATACCAGACCGT CCCAAATCATATCAGTATTTGAGAATTTGAAGCAGGATGAGCCGAAAAACAACTTTACAATTGGAATTGTCGATGATGTG ACCAATTTGTCTCTTCCGGAAGGGGACATAATTGAGACCACACCTCAGGGGACAATAAGCTGCAAATTCTGGGGCTTGGG TTCCGACGGTACGGTTGGAGCAAACAAGTCTGCGATAAAGATAATAGGAGACAATACAGACCTGTATGTACAAGGTTATT TCTCCTATGACAGTAAAAAGTCAGGTGGAACTACCATTTCCCACTTAAGATTCGGTCCGAAGCCTCTGCGTTCCCCATAT CTTGTGTATAACGCTGATTATATCGCCTGCCACAACAAGTCCTTCATATACAATTATGATATTTTAAAAGGGCTTAAAAA GGGAGGTACTTTCGTACTTAACTGTCCGTGGAGCGAAGAGGAGCTGGACAAACATCTTCCCGCGTCAATGAAGAGATATA TTGCAAACAACGACATCAAGTTTTATATAATAGATGCTTTAAAAATTGCTTCCGACATTGGACTTGGCAACAGAATCAAC ATGGTTATGCAATCGGCGTTTTTCAAACTGGCAAATATAATCCCTATTGAGGATGCCGTAAAATATCTTAAAGATTCAAT TGAAAAAACTTACGGCAAAAAAGGCCACAAGATAGTTGAGATGAACAATGCCGCTGTTGACAAGGGACAGGAAGCATTAA TAAAGGTGAATGTGCCTGAGTCATGGAAAAATGCTGTTGATGAGGAAGTGCCGGTTAAGAAGGAAGAACCGGAGTTTGTG AAAAAGATTCAAAGAGTAATGGCCAGAAATGAAGGCGATGAACTGCCTGTAAGCGCATTTTTGGGAATGGAGGACGGCAC ACATCCGTTGGGTACCACGGCTTATGAAAAGCGTGGAATTGCTCCAATGATCCCCGAATGGCAGATTGACAAATGTATCC AGTGCGGACAGTGCTCCTTTGTATGTCCTCACAGTACAATCCGGTTGTTCCTGCTCAATGATGAAGAGCTAAGCCGGGCA CCGGAAACCTTTACAACCAAAAAAGCTATCGGAAAAGGATTTGAAAACTTGCATTTCCGCGTACAAGTTTCTCCCCTTGA CTGTACCGGATGTGGTAATTGTGCCGATGTTTGTCCTACAAAGGAAAAGGCATTGATCATGAAGCCTGCGGAAGAGCAAA TAGAAAAACAGGCCGACAACTGGGAGTTTGCGATGACTGTCACCCAGAAGGACAATTTGTTGGACCGCAATACTTTGAAA GGAAGCCAGCTTGTAAGGCCGCTTTTGGAGTTTAACGGAGCTTGTCCGGGATGCGGTGAGACACCGTATGTAAGACTTCT TACCCAGCTTTTCGGCGAGAGAATGATGATTGCCAACGCAACCGGATGTTCATCCATATGGGGAGCAAGTTCTCCATCCA TAGCTTATACCACCAATGCGGAGGGCAAAGGACCGGCATGGGCAAATTCTCTGTTTGAGGATAATGCGGAGTTCGGCTTT GGAATGTATTTGGCGGTCAAGCAGATAAGGGAGAGACTTGCCGACCTTATGCAAATGGCTGTAAATTCGGATATTGATGA AAAGGTTAAAAATGCCTTCAGAGAATGGCTGGACAACAAAGATGAGGCTGAAGGTTCAAAGACAGCTACAAAGCATATAT TTGAGGCGTTGAAAGACTATGATTACAAAGGAAACCGCATAATTGAGGAGATAATGGAAAAGAAGGATTATCTCATCAAG AAGTCCATCTGGATGATAGGTGGAGACGGATGGGCTTATGACATCGGCTATGGAGGACTGGATCAGGTTCTTTCCTCCGG CGAGGATGTGAATATACTTGTATTGGATACGGAAGTTTACTCCAATACCGGCGGTCAGTCTTCAAAAGCAACTCCGACAG CGGCTGTTGCAAAGTTTGCGGCTGCAGGTAAGAGGGTAAGGAAAAAAGATCTGGGACTTATGGCTATGAGTTATGGTTAT GTGTATGTGGCTCAGATAGCCATGGGCGCAAATATGAATCAGACCATAAAAGCCATGGTGGAGGCGGAAAGCTACAAAGG ACCGTCACTTATAATTGCGTATTCGCCATGTATAAGCCATGGTATCAAAACGGGTATGGGCACGAGCATATTTGAAGAAA AGCGCGCTGTTGAAGCTGGTTACTGGCATTTGTACAGATACAACCCGATGCTTAAAGAGCAAGGCAAGAATCCGTTTATT CTGGAGTCGAAAGAACCGACCACTCCTTACAAGGAGTTCCTCAAGGGAGAAATCAGATATTCACAGCTTGCGAATGTATT CCCGGATGTGGCGGGAGAAATGTTTGACGCTGCGGAAAGGGATGCAAGAGAACGTTATGAGACTTACAAGAGACTGGCAG AACAGAAATATTCGTAA Protein sequence : MKKVQKFETMDGNQAAAYASYAFTDVATIYPITPSSPMAETVDEWAAHGKKNIFGQPVRVVQMQSEAGAAGAMHGSLAAG ALTTTYTASQGLLLMIPNLYKMAGELLPGVLHVSARAIATHALSIFGDHQDVMACRQTGVALLASSNVQEAADLGYVAHL SAIKSRVPFIHFFDGFRTSHEYQKIGLIEYDELAKLVDHNAIKEFRDRALNPEHPVARGTAQNPDIYFQGREVQNKFYDN VPDIVAGYMQEIKRITGREYRPFDYYGAKDAEYVIVAMGSVCDTIDETIDYLMAKGEKVGSVRVHLYRPFSEKYFFDVIP KTVKKIAVLDRTKEPGAPGEPLYLDVSKMYLSKENRPVIVGGRYGLGSKDTRPSQIISVFENLKQDEPKNNFTIGIVDDV TNLSLPEGDIIETTPQGTISCKFWGLGSDGTVGANKSAIKIIGDNTDLYVQGYFSYDSKKSGGTTISHLRFGPKPLRSPY LVYNADYIACHNKSFIYNYDILKGLKKGGTFVLNCPWSEEELDKHLPASMKRYIANNDIKFYIIDALKIASDIGLGNRIN MVMQSAFFKLANIIPIEDAVKYLKDSIEKTYGKKGHKIVEMNNAAVDKGQEALIKVNVPESWKNAVDEEVPVKKEEPEFV KKIQRVMARNEGDELPVSAFLGMEDGTHPLGTTAYEKRGIAPMIPEWQIDKCIQCGQCSFVCPHSTIRLFLLNDEELSRA PETFTTKKAIGKGFENLHFRVQVSPLDCTGCGNCADVCPTKEKALIMKPAEEQIEKQADNWEFAMTVTQKDNLLDRNTLK GSQLVRPLLEFNGACPGCGETPYVRLLTQLFGERMMIANATGCSSIWGASSPSIAYTTNAEGKGPAWANSLFEDNAEFGF GMYLAVKQIRERLADLMQMAVNSDIDEKVKNAFREWLDNKDEAEGSKTATKHIFEALKDYDYKGNRIIEEIMEKKDYLIK KSIWMIGGDGWAYDIGYGGLDQVLSSGEDVNILVLDTEVYSNTGGQSSKATPTAAVAKFAAAGKRVRKKDLGLMAMSYGY VYVAQIAMGANMNQTIKAMVEAESYKGPSLIIAYSPCISHGIKTGMGTSIFEEKRAVEAGYWHLYRYNPMLKEQGKNPFI LESKEPTTPYKEFLKGEIRYSQLANVFPDVAGEMFDAAERDARERYETYKRLAEQKYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 58 |
