Gene Information

Name : Cthe_3066 (Cthe_3066)
Accession : YP_001039455.1
Strain : Clostridium thermocellum ATCC 27405
Genome accession: NC_009012
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 3607660 - 3608385 bp
Length : 726 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: ATPase; KEGG: ctc:CTC01493 transporter

DNA sequence : 
ATGGAAACTGTACTTGAAATAAAGGGACTTACCAAATTATATAAGAATGGAAGAGGAATTTTTGATATAAATCTTGAAGT
ATACAGAGGGGATGTGTTTGGATTCCTCGGCCCCAACGGTGCGGGAAAGACTACCGCTATGAAAATTATGACGGGTCTTA
TGCATCCGAACAGCGGAGACGTAAAAATTTTCGGGCACAGCGTTATAACCGAATTTGAACAGGCCATGAAGAAAGTGGGC
TGTATAATTGAAACTGCGGAATCCTATGCATATCTTACACCTTATGAGAATTTAAAACTTTTTGCTAGATTCTATGATGA
CGTGGATGATAAAAGAATTGATGAAGTCCTGGAGCTCACCGGCATTCTTAAGTTCAAAAAAGAAAAAGTGAAGAATTTTT
CTCTTGGTATGAAGCAAAGGCTCGGGTTGGCTGCGGCAATTTTGTCAAGGCCCGAATTGGTGATATTGGACGAGCCGTTA
AATGGACTTGACGTGGAAGGCATGATAGAAATCAGAAAACTTATCAAGGCACTTGCAGAGAACGAAAAGACAACATTCTT
TATTTCAAGCCATCTTATCCATGATGTGGAAATAACATGTAACAGGATTGGAATACTGTACGACGGAAAACTGGTTAATG
TGGATACAACCGAAAACATACTTAAAAACTTTGCTTCACTGGAGAACTATTTTGTAAGCGAGGTAGGTAAAAATGAAAGC
GTTTAA

Protein sequence : 
METVLEIKGLTKLYKNGRGIFDINLEVYRGDVFGFLGPNGAGKTTAMKIMTGLMHPNSGDVKIFGHSVITEFEQAMKKVG
CIIETAESYAYLTPYENLKLFARFYDDVDDKRIDEVLELTGILKFKKEKVKNFSLGMKQRLGLAAAILSRPELVILDEPL
NGLDVEGMIEIRKLIKALAENEKTTFFISSHLIHDVEITCNRIGILYDGKLVNVDTTENILKNFASLENYFVSEVGKNES
V

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 4e-39 46
cdd4 CAA63569.1 - Not tested PaLoc Protein 3e-34 43
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 2e-24 42
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 2e-24 42
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 2e-24 42
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 2e-24 42