Gene Information

Name : Cthe_2858 (Cthe_2858)
Accession : YP_001039250.1
Strain : Clostridium thermocellum ATCC 27405
Genome accession: NC_009012
Putative virulence/resistance : Unknown
Product : transposase, mutator type
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 3375991 - 3377127 bp
Length : 1137 bp
Strand : -
Note : PFAM: transposase, mutator type; KEGG: det:DET1301 ISDet4, transposase

DNA sequence :
TTGCAGGAAGCATTGAAGGATCTGCTCGGAGATACGATACAAAATATGTTGGAAGCAGAGCTGGATGAACATCTCGGATA
TGAAAAGTACGAATCAACTGAAGAAGCGAAATCAAATTACCGTAACGGGTACACATCAAAAACATTAAAGTCAAGTGTAG
GGCAAGTGGAAATAGATATCCCGCGGGACCGGAATGCAGAATTCGAGCCGAAAATTGTTCCCAGGTATAAAAGGGACATT
TCAGAAATTGAAAATAAAATAATAGCAATGTATGCGCGGGGGATGTCTACCAGAGAAATCAACGAGCAGATACAGGAAAT
CTACGGATTTGAAGTATCTGCCGAGATGGTAAGTAAGATCACTGATAAAATACTACCTGAGATAGAAGAGTGGCAGAAAA
GGCCTCTGGGAGAGGTTTATCCGATAGTATTTATTGACGCAATTCATTTTTCAGTAAAAAATGACGGCATTGTTGGGAAG
AAGGCCGTATATATTGTGCTGGCGATTGATATAGAAGGGCAGAAAGATGTTATCGGTATTTATGTAGGAGAAAATGAGAG
CTCAAAATTCTGGCTGAGTGTCTTAAATGACCTTAAAAACAGAGGAGTTAAAGACATCCTGATTCTCTGTGCTGATGCAC
TTTCAGGGATAAAGGATGCAATCAATGCGGCTTTTCCGAATACTGAATATCAGAGGTGTATAGTACACCAGATAAGAAAC
ACGCTAAAGTATGTGTCAGATAAAGACCGAAAGGAATTTGCCAGGGACTTGAAACGGATATATACGGCTCCGAATGAGAA
GGCAGGGTACGACCAGATGCTTGAGGTTTCAGAGAAATGGGAGAAGAAATACCCGGCAGCTATGAAGAGCTGGAAGAGCA
ATTGGGATGTTATTTGTCCATTTTTTAAGTATTCGGAGGAACTACGTAAAATCATGTATACGACCAATACTATTGAGAGC
CTGAATAGCAGTTATAGAAGGATAAACAAATCAAGGACAGTATTTCCTGGCGACCAGTCACTTTTAAAGAGCATATATTT
AGCTACAGTGAAGATTACTTCAAAATGGACGATGCGTTACAAAAACTGGAGGTTGATACTGGGACAGCTACAGATTATGT
TCGAAGGGCGTATATAG

Protein sequence :
MQEALKDLLGDTIQNMLEAELDEHLGYEKYESTEEAKSNYRNGYTSKTLKSSVGQVEIDIPRDRNAEFEPKIVPRYKRDI
SEIENKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPEIEEWQKRPLGEVYPIVFIDAIHFSVKNDGIVGK
KAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLNDLKNRGVKDILILCADALSGIKDAINAAFPNTEYQRCIVHQIRN
TLKYVSDKDRKEFARDLKRIYTAPNEKAGYDQMLEVSEKWEKKYPAAMKSWKSNWDVICPFFKYSEELRKIMYTTNTIES
LNSSYRRINKSRTVFPGDQSLLKSIYLATVKITSKWTMRYKNWRLILGQLQIMFEGRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 3e-97 53
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 5e-88 46