|
Name : Cthe_2719 (Cthe_2719) Accession : YP_001039111.1 Strain : Clostridium thermocellum ATCC 27405 Genome accession: NC_009012 Putative virulence/resistance : Unknown Product : transcription antitermination protein nusG Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 3207754 - 3208287 bp Length : 534 bp Strand : + Note : KEGG: ctc:CTC02614 transcription antitermination protein nusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW; SMART: NGN; KOW (Kyrpides, Ouzounis, Woese) motif DNA sequence : ATGCCGAATAATGAGGCATCCGAGGAAGCAAAATGGTATGTGGTTCATACCTATTCCGGATATGAAAACAAAGTGAAGGC AAACCTTGAGAAAATTGTTGAAAACAGGAACTTGCAGGATTATATACTTGACATAGTTGTGCCTATGGAGGAGCAGATTG AAATAAAAGACGGCAAGAAAAAAGCCTCCCTCAAGAAAGTATTCCCCGGATACGTTCTTGTTAAGATGATTATGAATGAT GAATCCTGGTATGTGGTCAGAAATACCAGGGGGGTTACAGGGTTTGTCGGACCGGGCTCAAAAGCCGTGCCTTTAACCGA TGAAGAGATAAGGGCTATGGGAGTTGAAGAATTTGCTCCTGTGCTGGACTATGAGGTCGGAGACAATGTAAGGGTGGTTT CCGGGCCTTTGGAAAACTTTATCGGAATAGTTGAAGAAATAAATCTGGAAAAGAAAAAGGTGCGTGTTTCCGTTTCGATG TTCGGAAGAGAGACACCTGTGGAACTTGAACTTCACCAGATTCAGAAAATATAG Protein sequence : MPNNEASEEAKWYVVHTYSGYENKVKANLEKIVENRNLQDYILDIVVPMEEQIEIKDGKKKASLKKVFPGYVLVKMIMND ESWYVVRNTRGVTGFVGPGSKAVPLTDEEIRAMGVEEFAPVLDYEVGDNVRVVSGPLENFIGIVEEINLEKKKVRVSVSM FGRETPVELELHQIQKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 2e-31 | 45 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 2e-26 | 44 |
