Gene Information

Name : Cthe_2671 (Cthe_2671)
Accession : YP_001039063.1
Strain : Clostridium thermocellum ATCC 27405
Genome accession: NC_009012
Putative virulence/resistance : Unknown
Product : transposase, mutator type
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 3151579 - 3152802 bp
Length : 1224 bp
Strand : -
Note : PFAM: transposase, mutator type; KEGG: det:DET1301 ISDet4, transposase

DNA sequence :
ATGGCAAGAAAAAGGATAATAACACCAGAAAAGAAAGAGCTTATCAGAAATCTCATTTCTGAGTACAACATTACTTCAGC
AAAGGATTTGCAGGAAGCATTGAAGGATCTGCTCGGAGATACGATACAAAATATGTTGGAAGCAGAGCTGGATGAACATC
TCGGATATGAAAAGTACGAATCAACTGAAGAAGCGAAATCAAATTACCGTAACGGGTACACATCAAAAACATTAAAGTCA
AGTGTAGGGCAAGTGGAAATAGATATCCCGCGGGACCGGAATGCAGAATTCGAGCCGAAAATTGTTCCCAAGTATAAAAG
GGACATTTCAGAAATTGAAAATAAAATAATAGCAATGTATGCGCGTGGGATGTCTACCAGAGAAATCAACGAGCAGATAC
AGGAAATCTATGGGTTCGAAGTATCTGCTGAAATGGTAAGTAAGATCACTGATAAAATACTACCTGAGATAGAAGAGTGG
CAGAAAAGGCCTCTGGGAGAGGTTTATCCGATAGTATTTATTGACGCAATTCATTTTTCAGTAAAAAATGACGGCATTGT
TGGGAAGAAGGCCGTATATATTGTGCTGGCGATTGATATAGAAGGGCAGAAAGATGTTATCGGTATTTATGTAGGAGAAA
ATGAGAGCTCAAAATTCTGGCTGAGTGTCTTAAATGACCTTAAAAACAGGGGTGTTAAAGACATTCTGATTCTCTGTGCT
GATGCACTTTCAGGGATAAAGGATGCAATCAATGCGGCTTTTCCGAATACTGAATATCAGAGGTGTATAGTACACCAGAT
AAGAAACACGCTAAAGTATGTGTCAGATAAAGACCGAAAGGAATTTGCCAGGGACTTGAAACGGATATATACGGCTCCGA
ATGAGAAGGCAGGGTACGACCAGATGCTTGAGGTTTCAGAGAAATGGGAGAAGAAATACCCGGCAGCTATGAAGAGCTGG
AAGAGCAATTGGGATGTTATTTGTCCATTTTTTAAGTATTCGGAGGAACTACGTAAAATCATGTATACGACCAATACTAT
TGAGAGCCTGAATAGCAGTTATAGAAGGATAAACAAATCAAGGACAGTATTTCCTGGCGACCAGTCACTTTTAAAGAGCA
TATATTTAGCTACAGTAAAGATTACTTCAAAATGGACGATGCGTTACAAAAACTGGGGTTTGATACTGGGACAGCTACAG
ATTATGTTCGAAGGGCGTATATAG

Protein sequence :
MARKRIITPEKKELIRNLISEYNITSAKDLQEALKDLLGDTIQNMLEAELDEHLGYEKYESTEEAKSNYRNGYTSKTLKS
SVGQVEIDIPRDRNAEFEPKIVPKYKRDISEIENKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPEIEEW
QKRPLGEVYPIVFIDAIHFSVKNDGIVGKKAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLNDLKNRGVKDILILCA
DALSGIKDAINAAFPNTEYQRCIVHQIRNTLKYVSDKDRKEFARDLKRIYTAPNEKAGYDQMLEVSEKWEKKYPAAMKSW
KSNWDVICPFFKYSEELRKIMYTTNTIESLNSSYRRINKSRTVFPGDQSLLKSIYLATVKITSKWTMRYKNWGLILGQLQ
IMFEGRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 1e-98 54
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 1e-87 46