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Name : Cthe_2381 (Cthe_2381) Accession : YP_001038776.1 Strain : Clostridium thermocellum ATCC 27405 Genome accession: NC_009012 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2845403 - 2846674 bp Length : 1272 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGACATTAAATTGATTAGAAGTAATCCCGAAATATTAAAAAAAGCTCTTCAAAAAAGAAAAGACAATTTTGATGT GAACGGGCTTTTAAGCCTTGATGAGAAAAGAAGAAAAACTCTCGTGGAACTGGAACAACTAAGAAACAAACAGAATGAGA ATTCAAAGCTTATTCCCAAATACAAAAAAGAAGGAAAAGATGTATCATCTCTGATGGAGGAAATGAAAAGTCTTTCGGAA AAAATAAAAGCTCTCGATGCGGAAGTCAGAAAGATTGACGAGGAATTGAACGCAATTCTTCTGACCATACCCAATATACC ACATGAAAGTGTTCCGATGGGAGACAGTGACGAGGACAACGTTGAGGTAAGAAGATGGGGTGAACCCAGAAAATTTGATT TTACTCCAAAGCCGCACTGGGAGATAGGAGAAAATCTCGACATACTCGACTTTTCCAAAGCTGCAAAAGTGACAGGGGCA AGATTTACATTTTACAAGGGACTTGGGGCAAGACTTGAAAGAGCTCTAATGAACTTCATGCTGGATCTGCATGTCGATAA ACATGGGTATGTGGAAGTATTTCCACCGTTTTTGGTACATAGAAACAGTATGATTGGAACGGGCCAACTGCCCAAATTTG AAGAAGATGCATTTAAAGTAAGTGATACCGATTATTTCCTGATACCGACTGCCGAAGTGCCAGTAACCAACATGTACAGG GAACAAATACTTGACGTGAAAGACCTTCCCATAAAGCATGTTGCATATTCGGCATGCTTCAGAGCGGAGGCCGGTGCTGC AGGAAGGGATACAAGAGGTCTTATAAGACAGCATCAATTTAACAAAGTTGAGCTTGTAAAATTCACAACACCTGAGACAT CCTATGAAGAACTGGAAAAGCTCACAAGAGATGCTGAGGAAGTATTGCAGATGTTGGAAATTCCATACAGAGTGGTGAAG ATATGTGTGGGAGACCTTGGATTCACGGCGGCAATGAAATATGACATAGAAGTATGGATGCCCAGCTACAACAGATATGT GGAAATATCCTCATGCAGTAACTTTGAGGACTTCCAGGCAAGAAGAGCAGGAATAAAGTTCAGGAGAGGACTAAATGAAA AACCGGAGTTTGTTCATACTTTGAATGGCTCAGGAGTTGCAATGGGAAGAGCAACCGCCTGCATACTTGAAAACTATCAG CAGGAAGACGGATCGGTCGTTGTGCCCAAGGTCCTCAGGGAGTATTTAGGAGGCATCAGTGTAATTAAATAG Protein sequence : MLDIKLIRSNPEILKKALQKRKDNFDVNGLLSLDEKRRKTLVELEQLRNKQNENSKLIPKYKKEGKDVSSLMEEMKSLSE KIKALDAEVRKIDEELNAILLTIPNIPHESVPMGDSDEDNVEVRRWGEPRKFDFTPKPHWEIGENLDILDFSKAAKVTGA RFTFYKGLGARLERALMNFMLDLHVDKHGYVEVFPPFLVHRNSMIGTGQLPKFEEDAFKVSDTDYFLIPTAEVPVTNMYR EQILDVKDLPIKHVAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTTPETSYEELEKLTRDAEEVLQMLEIPYRVVK ICVGDLGFTAAMKYDIEVWMPSYNRYVEISSCSNFEDFQARRAGIKFRRGLNEKPEFVHTLNGSGVAMGRATACILENYQ QEDGSVVVPKVLREYLGGISVIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-115 | 58 |
