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Name : Cthe_2333 (Cthe_2333) Accession : YP_001038728.1 Strain : Clostridium thermocellum ATCC 27405 Genome accession: NC_009012 Putative virulence/resistance : Resistance Product : two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 2780172 - 2780870 bp Length : 699 bp Strand : - Note : PFAM: response regulator receiver; transcriptional regulatory protein-like; KEGG: tte:TTE2689 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain DNA sequence : ATGAGCGCGAAAATCCTTGTTGTTGATGACGAGAAAAATATAGTTGACATTCTCAAATTTAATTTGGCAAAAGAGGGTTT TTCCACGCTTGAAGCAAATGACGGCGAACAAGCTATTGAACTTGCGCTAAGTGAAAAGCCGGATTTGATACTGCTGGACA TAATGCTTCCCAAATTGGACGGCTTTACCGTTTGCCGCAAATTGAGGGAAAGTATATCCACTCCCATTATAATGATTACT GCAAAGGAAGAGGAAGTTGACAAGGTATTGGGATTGGAGCTTGGAGCGGATGATTATATAACAAAGCCTTTCAGCACGAG GGAGCTGATGGCGAGAGTAAAAGCCAATTTAAGAAGGGTTGCTTCCTCTGCGGAGACTCAAAAGAAGCAAAGCAATTATT TGAAATTCGGAGACTTGGAGATAGATATCGAACATTATGAAGTAAGAAGAAACAATGAGGTAATTGAGCTGACATTAAGG GAATTTGAACTTGTAAAATTCCTGGCATTGCAGCCGGGCCAGATATTTTCAAGGGAGACCCTTTTGGAAAAGGTCTGGGG TTATGAATATTACGGCGACGTCCGTACGGTGGATGTGACTGTAAGAAGAGTGAGGGAGAAGATTGAAAAGGATCCGAGCA ATCCTTGCTACATTATGACCAAAAGAGGGGTAGGATATTATTTCAACAAATTAAGTTAA Protein sequence : MSAKILVVDDEKNIVDILKFNLAKEGFSTLEANDGEQAIELALSEKPDLILLDIMLPKLDGFTVCRKLRESISTPIIMIT AKEEEVDKVLGLELGADDYITKPFSTRELMARVKANLRRVASSAETQKKQSNYLKFGDLEIDIEHYEVRRNNEVIELTLR EFELVKFLALQPGQIFSRETLLEKVWGYEYYGDVRTVDVTVRRVREKIEKDPSNPCYIMTKRGVGYYFNKLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nisR2 | YP_006309922.1 | NisR | Not tested | FWisland_1 | Protein | 3e-22 | 44 |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 2e-27 | 41 |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 9e-34 | 41 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 1e-33 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_012469.1.7685629. | Protein | 2e-51 | 55 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | HE999704.1.gene2815. | Protein | 2e-50 | 54 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_012469.1.7686381. | Protein | 3e-46 | 49 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_002952.2859905.p0 | Protein | 2e-45 | 49 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_007793.3914279.p0 | Protein | 1e-45 | 49 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_003923.1003749.p0 | Protein | 1e-45 | 49 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_002745.1124361.p0 | Protein | 1e-45 | 49 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_009782.5559369.p0 | Protein | 1e-45 | 49 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_002951.3237708.p0 | Protein | 1e-45 | 49 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_007622.3794472.p0 | Protein | 2e-45 | 49 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_002758.1121668.p0 | Protein | 1e-45 | 49 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_009641.5332272.p0 | Protein | 1e-45 | 49 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_013450.8614421.p0 | Protein | 1e-45 | 49 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | AE016830.1.gene1681. | Protein | 2e-45 | 48 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | AE000516.2.gene3505. | Protein | 4e-40 | 48 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | HE999704.1.gene1528. | Protein | 1e-36 | 46 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | CP004022.1.gene3215. | Protein | 3e-31 | 46 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | CP001138.1.gene4273. | Protein | 2e-26 | 45 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | CP001918.1.gene5135. | Protein | 2e-22 | 45 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | BAC0533 | Protein | 1e-26 | 44 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_002695.1.915041.p | Protein | 5e-26 | 44 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | CP000647.1.gene4257. | Protein | 1e-26 | 44 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | CP000034.1.gene3834. | Protein | 5e-26 | 44 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | AF155139.2.orf0.gene | Protein | 2e-39 | 43 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | AM180355.1.gene1830. | Protein | 2e-32 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | CP000034.1.gene3671. | Protein | 5e-36 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_007793.3914065.p0 | Protein | 8e-32 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_002758.1121390.p0 | Protein | 8e-32 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_010079.5776364.p0 | Protein | 8e-32 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_002952.2859858.p0 | Protein | 8e-32 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_007622.3794948.p0 | Protein | 8e-32 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_003923.1003417.p0 | Protein | 8e-32 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_013450.8614146.p0 | Protein | 8e-32 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_002951.3238224.p0 | Protein | 8e-32 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | BAC0039 | Protein | 3e-32 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | BAC0596 | Protein | 2e-32 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | CP000034.1.gene2186. | Protein | 3e-32 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_002695.1.916589.p | Protein | 2e-32 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | CP001138.1.gene2239. | Protein | 2e-32 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | CP004022.1.gene1676. | Protein | 1e-28 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_011586.7046392.p0 | Protein | 2e-28 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_010410.6002907.p0 | Protein | 2e-28 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | AF162694.1.orf4.gene | Protein | 2e-28 | 41 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | BAC0197 | Protein | 6e-30 | 41 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | DQ212986.1.gene4.p01 | Protein | 1e-32 | 41 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_014475.1.orf0.gen | Protein | 6e-33 | 41 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | NC_005054.2598277.p0 | Protein | 6e-33 | 41 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | FJ349556.1.orf0.gene | Protein | 1e-36 | 41 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | AE015929.1.gene1106. | Protein | 8e-27 | 41 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | CP001918.1.gene3444. | Protein | 3e-31 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | VFG1389 | Protein | 5e-25 | 42 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | VFG0596 | Protein | 7e-28 | 41 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | VFG1563 | Protein | 5e-34 | 41 |
| Cthe_2333 | YP_001038728.1 | two component transcriptional regulator | VFG1702 | Protein | 6e-34 | 41 |
