Gene Information

Name : Cthe_0229 (Cthe_0229)
Accession : YP_001036661.1
Strain : Clostridium thermocellum ATCC 27405
Genome accession: NC_009012
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 276040 - 277059 bp
Length : 1020 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility-like; KEGG: sat:SYN_01112 UDP-N-a

DNA sequence : 
ATGGAAGGAGTAATATTAGTCACCGGTGCGGCAGGCTTTATCGGTTTCCACTTGGTACAGCGCTTGTTAAAAGAGGGTTG
TAACGTCGTAGGTATAGATAATTTAAATGAGTATTACGATGTTAAACTGAAAAAAGACCGCCTGAAATTGTTAAGTGAAA
ATAAAAACTTTGTATTCCGCAAAGTTGACATAAAAAACAAAAAGGCAGTGGACCGTATCTTTGAAACCTATCGGCCTTCC
TATGTAATCAATCTTGCGGCACAAGCGGGAGTGCGTTATTCCATTGAAAATCCCTATGCCTACGTGGATTCAAATTTGGT
AGGATTTGTGAACATTCTTGAGGCTTGCCGAAAATACCCTGTGAAGCACCTTATCTATGCTTCATCAAGTTCGGTATACG
GGGGAAACAAAGTTTCGCCGTTTTCCACCAGACATAATGTGGACCATCCTGTGTCTCTTTATGCAGCCACAAAAAAATCC
AATGAATTGCTGGCCCATACCTACAGTCATCTTTTCGGCATTCCCACAACAGGGCTGAGGTTTTTTACCGTTTACGGCCC
CTGGGGAAGACCGGATATGGCGTATTTCTCATTTACAAAAGATATTTTAAGCGGAAACCCCATTAAAGTGTTCAATTATG
GTAAAATGGAAAGAGACTTTACTTATATTGATGATGTGGTGGAAGGAATTGTAAAATTAATTGACAGAATCCCGACGCCT
AATGAAAACTGGGATGAAACTAAAGATGACATAAGTACCAGTTTTGCACCGTACAAAATCTACAATATCGGCAACAACAA
TCCTGTTCCGTTAATGAATTTCATAAGTGTTTTAGAGTCAGCTCTTGGTAAGGTTGCAAAAAAAGTATATTTGGATTTGC
AACCCGGCGATGTGCTCAGAACCTATGCGGATATTTCCGACCTTGAAAGGGATATAAATTTCAAGCCGTCCACAAGTATT
GAAGACGGGCTTCGAAAATTTGTACAGTGGTACAAGGAGTATTATAAAGCTGAAATTTAG

Protein sequence : 
MEGVILVTGAAGFIGFHLVQRLLKEGCNVVGIDNLNEYYDVKLKKDRLKLLSENKNFVFRKVDIKNKKAVDRIFETYRPS
YVINLAAQAGVRYSIENPYAYVDSNLVGFVNILEACRKYPVKHLIYASSSSVYGGNKVSPFSTRHNVDHPVSLYAATKKS
NELLAHTYSHLFGIPTTGLRFFTVYGPWGRPDMAYFSFTKDILSGNPIKVFNYGKMERDFTYIDDVVEGIVKLIDRIPTP
NENWDETKDDISTSFAPYKIYNIGNNNPVPLMNFISVLESALGKVAKKVYLDLQPGDVLRTYADISDLERDINFKPSTSI
EDGLRKFVQWYKEYYKAEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1I AAA64648.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-97 61