Gene Information

Name : Cthe_1869 (Cthe_1869)
Accession : YP_001038283.1
Strain : Clostridium thermocellum ATCC 27405
Genome accession: NC_009012
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 2217775 - 2218698 bp
Length : 924 bp
Strand : +
Note : KEGG: chy:CHY_2261 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain

DNA sequence :
ATGGAACATTTAATCAGCCTTCATGATTTAACAGTCGAGGATTTTGAATCCATTTTCAAACTTGCGGAAAAACTTAAAAG
GCAGCAAAAAGAAGGTATACCTCACCACCTGCTCAAAGGCAAAACTCTTGGTATGATTTTTACAAAGTCATCCACCAGGA
CCCGTGTATCTTTTGAAGTGGGAATGTACCAGCTTGGAGGTTATCCTCTGTTCCTCAGTGCAAACGACATACAGTTGGGA
CGCGGCGAAACAATTTATGATACCGCCCAGGTTCTTTCAAGATATGTTGACGGAATAATGATTAGAACCTTTGCCCAAAG
TGACGTCGAAGACCTTGCCAGATACGGCAATGTGCCCGTTATAAACGGTCTTACCGACCTGATGCACCCATGCCAGATTC
TCGCGGACCTCTTCACCATTTATGAACACAAGGGAACTTTAAAAGGCCTCAAACTTGCGTACGTCGGAGACGGAAACAAC
GTTGCAAACTCACTTCTTCACGGTTGTGCGAAAGTGGGTATGGATATAGCTGTTGCCTCTCCAAAGGGTTATGAATGTGA
CAGCCGGATAGTGGAGGAAGCCAAAGAAGATGCGAAAGCCTCCGGAGCAAATATTTTATTGACCGAAGATCCGGAAGAGG
CAATTAAGGACGCCGATGTGGTCTATACCGACACATGGGTAAGCATGGGACAGGAAAGCGAGAAAGAAGAAAGAATCAAG
GTTTTCATGCCCTATCAGGTAAACAACACGCTGTTCTCAAAAGCCCATGAGGATGCAATATTCCTGCATTGTTTACCCGC
ATACAGGGGTTATGAAGTAACCGAGGATGTAATCGACGGTTCTCAATCCGTTATCTTTGATGAAGCTGAAAACAGGCTGC
ATGTCCAGAAAGCAATAATGGCACTGCTTATGGGCAATAAATAG

Protein sequence :
MEHLISLHDLTVEDFESIFKLAEKLKRQQKEGIPHHLLKGKTLGMIFTKSSTRTRVSFEVGMYQLGGYPLFLSANDIQLG
RGETIYDTAQVLSRYVDGIMIRTFAQSDVEDLARYGNVPVINGLTDLMHPCQILADLFTIYEHKGTLKGLKLAYVGDGNN
VANSLLHGCAKVGMDIAVASPKGYECDSRIVEEAKEDAKASGANILLTEDPEEAIKDADVVYTDTWVSMGQESEKEERIK
VFMPYQVNNTLFSKAHEDAIFLHCLPAYRGYEVTEDVIDGSQSVIFDEAENRLHVQKAIMALLMGNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 9e-50 41
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 9e-50 41
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-50 41
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-50 41
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 5e-52 41
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-50 41