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Name : Cthe_1700 (Cthe_1700) Accession : YP_001038114.1 Strain : Clostridium thermocellum ATCC 27405 Genome accession: NC_009012 Putative virulence/resistance : Unknown Product : recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 2022140 - 2023468 bp Length : 1329 bp Strand : - Note : PFAM: Resolvase-like; Recombinase; KEGG: sak:SAK_0764 prophage LambdaSa04, site-specific recombinase, resolvase family DNA sequence : ATGGGAGCTTATTGCAGAGTATCAACAGACCAATTAGAACAGTTATCAAGCTATGAAGCACAGGTAGCTTATTATACATC TTATATAACAAATCATCCAGATTATGAATTCGGAGGAATTTACGCAGATGAGGGGATTTCAGGGACAAACACTAAAAAGA GAGAACAGTTCAATAAAATGATAGAAGACTGCAAAGCAGGGAAAATAGATATGATAATAACCAAGTCTATATCAAGGTTT GCAAGAAATACACTTGATACATTAAACTACGTAAGACAGCTTAAAGAATTAGGTATTGGAGTAATATTTGAAAAGGAAAA TATTAATACTTTAGATTCAAAGGGAGAAGTACTGCTTACAATCCTCAGCTCCCTTGCCCAAGATGAATCAAGAAGTATAA GTGAAAATTCTACATGGGGCATAAGGAGAAGGTTTGAACAGGGAAAGCTTCATATAAATCATACAAAGTTTTTAGGCTAT GATAAAGATGAAGAAGGAAATCTTGTGATAAATGAAAAGCAGGCTAAAATTGTAAGAAGAATATATAAGGATTACCTTGA CGGTAAAGGTGCAAACAGAATTGCAAGGGAACTTGAAGAAGAAGGTGTTCCTAACTGGAATGGAAAACCTAAGTGGTATG AAAGCAGTATAAGAAAGATTTTAAGTAATGAAAAATATAAAGGAGATGCACTTCTCCAAAAGACATATACTGTTGATTTT CTAACCAAAAAAAGAGCAGTAAACAATGGCGAAGTTCCAATGTATTATGTAGAAGAAAGCCATCCTGCAATTATAGATAA AGAAATTTGGGAAGCGGTACAGCTAGAGATGGAGAGAAGAAGAGCTTTTGCTGAAAAATATAACATCAGTAAGCTTGATT ATGCCACAGTAGATAATCCCTTTGCAGGAAGAGTTATCTGCGGACACTGCGGCAGTGCCTTTGGAAGAAAGGTATGGAAT TCTACTGATGAAAGGCTAAGAAGAGTGGTTTGGAGATGTAATAAAAAATATGAAGTAAAGGGAAAAAAGAGCTGTGAGAA TAAGCATATAGATGACAAGGTTTTATATCATGCCTTTGTAAATACATTTAATGCTATGGTGGAGAATAAGGAATACTTTA TGGAGAAGTGGAAGGAAGGACTTAAAAGTGATAACTTGCTTAAAAGATATAAGGCAAGGCAGTTTATTGAAATTTTAAAG GATGCAAAGATAGTAGAGGAGTTTGATGTTGATATGTATTTTAGAATAATAGAGAAAATGACAGTATTTGATGGAAAAAA GATAATAGTGAGTTTGCTTGATAGCACGGAGATTGAAGTTGCAATTTAA Protein sequence : MGAYCRVSTDQLEQLSSYEAQVAYYTSYITNHPDYEFGGIYADEGISGTNTKKREQFNKMIEDCKAGKIDMIITKSISRF ARNTLDTLNYVRQLKELGIGVIFEKENINTLDSKGEVLLTILSSLAQDESRSISENSTWGIRRRFEQGKLHINHTKFLGY DKDEEGNLVINEKQAKIVRRIYKDYLDGKGANRIARELEEEGVPNWNGKPKWYESSIRKILSNEKYKGDALLQKTYTVDF LTKKRAVNNGEVPMYYVEESHPAIIDKEIWEAVQLEMERRRAFAEKYNISKLDYATVDNPFAGRVICGHCGSAFGRKVWN STDERLRRVVWRCNKKYEVKGKKSCENKHIDDKVLYHAFVNTFNAMVENKEYFMEKWKEGLKSDNLLKRYKARQFIEILK DAKIVEEFDVDMYFRIIEKMTVFDGKKIIVSLLDSTEIEVAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-95 | 53 |
| SSU05_0953 | YP_001198319.1 | DNA recombinase | Not tested | 89K | Protein | 5e-89 | 50 |
| SSU98_0960 | YP_001200518.1 | DNA recombinase | Not tested | 89K | Protein | 5e-89 | 50 |
