Gene Information

Name : Cthe_1680 (Cthe_1680)
Accession : YP_001038096.1
Strain : Clostridium thermocellum ATCC 27405
Genome accession: NC_009012
Putative virulence/resistance : Unknown
Product : DNA polymerase, beta-like region
Function : -
COG functional category : R : General function prediction only
COG ID : COG1669
EC number : -
Position : 2004915 - 2005760 bp
Length : 846 bp
Strand : -
Note : PFAM: DNA polymerase, beta-like region; KEGG: ser:SEA0015 hypothetical protein

DNA sequence :
ATGAATGAAATTAAAACAGTATTAGATGAAGTTGTATCAGCATTGGCAGATGTGTCAGGCATCCAAGCAGTTGTGCTTGG
CGGCTCTCGCGCAAGGGGCACGCATTCCCCTGACTCAGATATTGATATCGGTATTTATTACAATACGGAGACACTTGACC
TTGTGTCCTTGAACAAGGCAGCCAAACTTGTGGATGATGAACACAGGGATAATTTGGTCGTTCCTCCTGGTGCATGGGGA
GAATGGGTTAATGGCGGTGGCTGGCTTATGATGGATGGATACCATGTTGACTTTATACTACGGGATATAGAACGTGTGGA
AAATGTAATTTCAGAATGTCAGGAAGGGATTATTTCCGCACATTATCAAACTGGACATCCCCATGCCTACATGAATGTGA
TGTATATGGGAGAATTAGCAGTATGCAAGGTATTGTGGGATAAACAGGGTAATATTTCAGCTTTGAAGCAAGTCGCGAAA
AAATACCCGCCGAAATTGAAAAGAGCTATTATTGGTTTCTTTACGTTTGAAGCAGAGTTTTCTTTAATGTTCGCGGAAAA
CAATGCCAGGAAAAACGATGTTTATTATGTTACTGCTCATATTGTACGGGCGATTTCAGCGCTGAACCAGGTGTTATTTG
CAGTAAATGAAGAGTACTGCCTGAACGAAAAAAAGGCAGTCGGCATGATAGAGCATTTTAACATTCACCCGCTTGGATAC
AAAGATAAAATAAATTCAATTTTTGCGGCAGCCGGAACAGATGGAGCAAATGCCTGTGTGCAGCTAAAGCAATTGATTAA
CGAAGTGAAAGGTATTATTCGAATGACTGATGAACATATCCGGTGA

Protein sequence :
MNEIKTVLDEVVSALADVSGIQAVVLGGSRARGTHSPDSDIDIGIYYNTETLDLVSLNKAAKLVDDEHRDNLVVPPGAWG
EWVNGGGWLMMDGYHVDFILRDIERVENVISECQEGIISAHYQTGHPHAYMNVMYMGELAVCKVLWDKQGNISALKQVAK
KYPPKLKRAIIGFFTFEAEFSLMFAENNARKNDVYYVTAHIVRAISALNQVLFAVNEEYCLNEKKAVGMIEHFNIHPLGY
KDKINSIFAAAGTDGANACVQLKQLINEVKGIIRMTDEHIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0955 YP_001198321.1 hypothetical protein Not tested 89K Protein 2e-72 51
SSU98_0962 YP_001200520.1 hypothetical protein Not tested 89K Protein 2e-72 51
smi_1712 YP_003446814.1 nucleotidyltransferase Not tested The aminoglycoside resistance gene cluster Protein 9e-73 51