|
Name : Cthe_1671 (Cthe_1671) Accession : YP_001038087.1 Strain : Clostridium thermocellum ATCC 27405 Genome accession: NC_009012 Putative virulence/resistance : Unknown Product : recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 1996540 - 1998108 bp Length : 1569 bp Strand : + Note : PFAM: Resolvase-like; Recombinase; KEGG: bca:BCE0419 DNA recombinase, putative DNA sequence : ATGGCAGTCAGTAAAAATGTCACAGTGATTCCGGCAAGAAAGCATACTCGCAAGAGCAAGGACGAGGAAAAACCGAAACT GCGCGTTGCTGCTTACTGCCGTGTTTCCACAGACAGCGAGGAGCAGGCTACCAGCTATGACACACAGATTGAGCATTACA CTGCCTACATACAAGGGCACCCCGACTGGATGCTGGCAGGAATATTTGCTGATGACGGCATTTCCGGTACCAATACTAAG AAGCGTGAAGAATTCAACCGCATGATTGACGAGTGTATGGCCGGTAATATCGATATGATCATTACAAAGTCCATCAGCCG CTTTGCGCGAAACACGCTGGACTGTTTGAAGTATATCCGCCAACTAAAGGACAAGAACATTCCGGTCTATTTTGAGAAAG AAAACATAAACACCATGGATTCCAAGGGCGAGGTTATGCTCACAATTATGGCATCTCTTGCGCAGCAGGAAAGCCAGTCC TTAAGTCAGAATGTGAAACTGGGTTTGCAGTATCGTTACCAACAAGGCGAAATACAAGTCAACTGTGCACGGTTCCTCGG TTATACCAAGGATGAGAATAAGCGCCTTGTGGTTGTGCCCGAAGAAGCTGAAATCGTAAAGCGCATTTATCGAGAATACC TTGAGGGTGCAAGTATGCTGAAGATTGCCCGTGGGTTAGAGGCCGACGGTATCTTAAACGGTGCAGGCAATGAGCGCTGG CACACCAGTAACATTAATAATATTCTGCGAAACGAAAAGTACATCGGAGATGCGCTCTTGCAGAAAACCTACACGGTTGA TTTTCTTACAAAAAAGCGGGTTAAGAACAACGGTATCGTTCCGCAGTACTATGTAGAGAACAGCCATGAAGCCATCATCC CGCGTGAAGTTTTCATGCAGGTGCAGGAAGAGCTTATCCGCCGCCGTATTGTGCACACAAGCCCAAACGGAAAGACCAGA ACCTTCAGCAGCAACCACGTCTTTGCTCAGATAATCATCTGCGGCAAATGCGGTGAGGTTTTTCGCAGGGTACATTGGAA CAACAGAGGTAAAAAGTCCATCGTCTGGCGCTGTGTCAGCCGGTTAGAAAACACCGGCCTATTCTGCGATGCCCGCACGG TACTGGAGAGCACCATCGAGCAAGTGCTAGTCACCGCCATTAATCAGACGCTTTGCGACAAAGACTCTTTCCTCACAACT CTACGGGATAACATCGCCACCATCATAAATCGTGAAAGCGACAAGGCCTTAGCGGATATCGATAAGCGGTTGGAGGAGTT GCAAACGGAACTTCTAAAATTGGCCACTTCCAATGCGGATTATGAAAAGGTTGGCGATGAGATTCACAGCCTGCGCGATC AGAAGCAAAAGCTGCAGGTTGAAAATGCCAACCGTGATGAACTCAAAAAGCAGATTGCTGATATGAGCACATTCCTAAAG AAGCAGTCCACCGCCCTCGCCGAATACGACAAGCAGCTTGTTCGGAGGTTGATTGATAAGGTCACGGTCTTCGAGGATAA ATTCACCGTGGAATTCAAGTCCGGCGTGACGGTGGATGTGGATGAATAA Protein sequence : MAVSKNVTVIPARKHTRKSKDEEKPKLRVAAYCRVSTDSEEQATSYDTQIEHYTAYIQGHPDWMLAGIFADDGISGTNTK KREEFNRMIDECMAGNIDMIITKSISRFARNTLDCLKYIRQLKDKNIPVYFEKENINTMDSKGEVMLTIMASLAQQESQS LSQNVKLGLQYRYQQGEIQVNCARFLGYTKDENKRLVVVPEEAEIVKRIYREYLEGASMLKIARGLEADGILNGAGNERW HTSNINNILRNEKYIGDALLQKTYTVDFLTKKRVKNNGIVPQYYVENSHEAIIPREVFMQVQEELIRRRIVHTSPNGKTR TFSSNHVFAQIIICGKCGEVFRRVHWNNRGKKSIVWRCVSRLENTGLFCDARTVLESTIEQVLVTAINQTLCDKDSFLTT LRDNIATIINRESDKALADIDKRLEELQTELLKLATSNADYEKVGDEIHSLRDQKQKLQVENANRDELKKQIADMSTFLK KQSTALAEYDKQLVRRLIDKVTVFEDKFTVEFKSGVTVDVDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-177 | 71 |
| SSU05_0953 | YP_001198319.1 | DNA recombinase | Not tested | 89K | Protein | 3e-151 | 60 |
| SSU98_0960 | YP_001200518.1 | DNA recombinase | Not tested | 89K | Protein | 3e-151 | 60 |
