Gene Information

Name : Cthe_1608 (Cthe_1608)
Accession : YP_001038025.1
Strain : Clostridium thermocellum ATCC 27405
Genome accession: NC_009012
Putative virulence/resistance : Unknown
Product : recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1938476 - 1938931 bp
Length : 456 bp
Strand : -
Note : PFAM: Recombinase; KEGG: bca:BCE0418 hypothetical protein

DNA sequence :
ATGAGCCATATACCTTTTGGATATACCATTCAAAACGGCAGGGCTGTCGTTAATGAAGAGGAAGCAGTTAAAATTAAGAA
ACTATTTGAGGCTTATCTTTCCGGGCTTTCTTTAGCCGAGGCGGCTCAAAAAGCGGGCATTAAGCGTTACCACACATCTA
TTGCAAGAATGCTTTCAGATAAACGGTATGTTGAGGATAAATTCTATCCGCCAATTATCAGCAGGGACACATTCGAAAAA
GCACAACTTGAAAGACGCAGACGAGCTGAGGCGCTTGGCAGGATTTATGAACATAAAGGAAATGAAAAGAAATGCCTGAA
TTTTAGGTTTCATGCTTCAATGCCAGATAATCTATACGATGATCCATTTCAGCAGGCAGAGTATGCTTATAGTCTTATCA
AGAGCGAGGTGATTTTAGATGACAACCAGGAATGTTACGATAATTCCTGCTCGTAA

Protein sequence :
MSHIPFGYTIQNGRAVVNEEEAVKIKKLFEAYLSGLSLAEAAQKAGIKRYHTSIARMLSDKRYVEDKFYPPIISRDTFEK
AQLERRRRAEALGRIYEHKGNEKKCLNFRFHASMPDNLYDDPFQQAEYAYSLIKSEVILDDNQECYDNSCS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smi_1714 YP_003446816.1 hypothetical protein Not tested The aminoglycoside resistance gene cluster Protein 1e-28 55
SSU98_0959 YP_001200517.1 recombinase Not tested 89K Protein 3e-19 43
SSU05_0952 YP_001198318.1 recombinase Not tested 89K Protein 3e-19 43