Gene Information

Name : Cthe_1572 (Cthe_1572)
Accession : YP_001037991.1
Strain : Clostridium thermocellum ATCC 27405
Genome accession: NC_009012
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 1900668 - 1901471 bp
Length : 804 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: ATPase; KEGG: dsy:DSY3499 hypothetical protein

DNA sequence : 
ATGAGCAAAAACTTATCGGTAATCAGTGATATTATTTTACATATAGAAAATGTAAATTACACTTATTATGACGACGCCGG
AAACCATGTTGAGGTACTTCGGGATATCAATTTGTCCGTCCGCCGGGGAGAATTCCTTTCCATCATAGGTTCCTCCGGTT
GCGGAAAGACGACGCTCTTACGGCTTATAGCAGGTCTTGACAAGCCGGAAACAGGAACCCTGATTCTTAACGGAGAGCAA
ATCTCCGGACCAGATCCAGAGCGGGGCTACGTTTTTCAGCATGGAGGTCTTTTTCAATGGCTGACTGTTGAGAAAAATAT
CGCAACCGGACTTAAGGCACGCCATGTTTATAGGGAGAATAAACACCGTATTGCCCATTATATAGACCTGATTGGACTTA
AGGGGTTTGAAAAATGTTACCCGCATCAGTTAAGCGGAGGTATGGCTCAGAGAGTTGCTATTGCCAGGGCATTGATCAAT
AATCCAAAGGTACTGCTTCTTGATGAACCCATGAGTGCCTTAGATTCCTTTACCCGTTCCGATATTCAGGATAAATTGCT
TGAGCTTCATAAAGAAAATAAAACGACAATGATTCTGGTAACCCACGATGTGGACGAAGCAATCTATCTTTCCGACCGTA
TTGTGGTTATGACTCCGCGGCCCGGAAAAATCAGTGAGATCATGGAGATTAATCTCCCACATCCTCGGCATCGTGGAGGA
ACCGAATTTCTTTCCCTTCGACGGAATATATTAGAAAAACTGCATCTGGCAAGTGCGCTGCCACAGCCGGAATATACCAT
ATAG

Protein sequence : 
MSKNLSVISDIILHIENVNYTYYDDAGNHVEVLRDINLSVRRGEFLSIIGSSGCGKTTLLRLIAGLDKPETGTLILNGEQ
ISGPDPERGYVFQHGGLFQWLTVEKNIATGLKARHVYRENKHRIAHYIDLIGLKGFEKCYPHQLSGGMAQRVAIARALIN
NPKVLLLDEPMSALDSFTRSDIQDKLLELHKENKTTMILVTHDVDEAIYLSDRIVVMTPRPGKISEIMEINLPHPRHRGG
TEFLSLRRNILEKLHLASALPQPEYTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-53 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cthe_1572 YP_001037991.1 ABC transporter-like protein BAC0162 Protein 4e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cthe_1572 YP_001037991.1 ABC transporter-like protein VFG0344 Protein 4e-33 41