Gene Information

Name : Cthe_1526 (Cthe_1526)
Accession : YP_001037947.1
Strain : Clostridium thermocellum ATCC 27405
Genome accession: NC_009012
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1852039 - 1852803 bp
Length : 765 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: ATPase; KEGG: lin:lin2219 similar to ABC transporter (ATP-binding protein)

DNA sequence : 
ATGGAAGCAGTACTTGAAGCAAAGAACCTGAGGAAGGAATATGGTTCAAAGGGAATGGCTTTTACGGCTTTGGACGGTAT
TGACTTAAAAGTATACAAAGGGGAATTCCTGGGAATAATGGGTCCGTCAGGAGCAGGCAAAACCACCTTGCTAAATATCC
TGTCTACAATCGACAGACCTACATCAGGCAATATTTTTTATGATGGCAGGGATGTTTTAACTATGAAAAACAGGGAACTT
TCATTGTTCAGAAGAAACAAGATCGGATTTTTGTTTCAGGACTTCAATCTTTTGGACAATATGTCGGTTGAAGATAACAT
AGCGTTGCCCCTCGCACTTTCAAATGTAAATGTAAAGGAAATAAAAGAAAAGGTGGAAAAGTTAAGTGAGTTCTTTGGAT
TAAAGGAACATCTTAAGAAATACCCTTATCAGCTGTCAGGGGGGCAAAAGCAAAGAGCGGCCGCAGCCAGAGCACTTATC
ACATCGCCGTCCATAGTTTTTGCTGATGAACCTACAGGAGCGTTGGATTCCAAATCTTCGCAGGAATTATTGCAATGCCT
TTTGAGGATGAATGAGGAATTGAATGCAACTATAATAATGGTTACCCATGATGCTTTTGCAGCCAGTTACTGCAAAAGAA
TTTTATACCTGAAGGATGGAAAAATTCATGCAAGATTGGATAAAGACTCGACCAGAAAAGAGTTCTTTAAAAGAATTATC
GACTTTGTCGGAACTATGGGAGGTGGCGTGGGTGAACTCATTTAA

Protein sequence : 
MEAVLEAKNLRKEYGSKGMAFTALDGIDLKVYKGEFLGIMGPSGAGKTTLLNILSTIDRPTSGNIFYDGRDVLTMKNREL
SLFRRNKIGFLFQDFNLLDNMSVEDNIALPLALSNVNVKEIKEKVEKLSEFFGLKEHLKKYPYQLSGGQKQRAAAARALI
TSPSIVFADEPTGALDSKSSQELLQCLLRMNEELNATIIMVTHDAFAASYCKRILYLKDGKIHARLDKDSTRKEFFKRII
DFVGTMGGGVGELI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cthe_1526 YP_001037947.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-34 46
Cthe_1526 YP_001037947.1 ABC transporter-like protein CP001581.1.gene598.p Protein 5e-35 42
Cthe_1526 YP_001037947.1 ABC transporter-like protein NC_008702.1.4606598. Protein 6e-28 42
Cthe_1526 YP_001037947.1 ABC transporter-like protein NC_012469.1.7686878. Protein 6e-34 41