Gene Information

Name : Cthe_1433 (Cthe_1433)
Accession : YP_001037857.1
Strain : Clostridium thermocellum ATCC 27405
Genome accession: NC_009012
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1754585 - 1755358 bp
Length : 774 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: dsy:DSY1017 hypothetical protein

DNA sequence :
ATGCAAAAAAGAGATTTGTTTTCCTTAAAAGGCAGAGTTGCAGTAGTCACGGGAGCATCATCGGGACTTGGTGTTCAAAT
GGCCAAAGCTCTTGCAGCCCAGGGAGCTGATATTGTTATTTTGGCGAGACGCAAGGAAAAACTTGAGAAGGTCGCGGAAG
AGATCCGGCAATTTGGAGTAAGATGCCTTCCCATAGAGTGTGATGTAACGAAAATCGAAATGGTCAGAAAAGCTGCCGAG
CTTGCCGAAAAAGAATTCGGAAAAGTTGACATTTTAATAAACAATGCAGGCAGCGGTGGTATAGCCCCGGCTGAGGAAAC
AAGCGATGAAATGTGGAGCAATACAATTAATGTCGATCTCAGCGGAGTTTTTATGGTTGCCCGGGAATTTGGCAAAATTA
TGATAAAAAACAAGTATGGAAGAATTATTAATATTTCTTCCATATACGGCATGGTTGGTAACATGGCACATCCAAGCGCT
GCTTATCATGCGGCCAAAGGCGGTGTGATAAATCTTACAAGAGCTTTGGCGGCAGAGTGGGCAAAATACGGCATTACGGT
AAATGCAATATGCCCGGGTTATTTTGTTACGGAGCTTACCGAGGACGTTCTTAACACTGAATATTTCACCAATTACATGA
AATCCACTGTTCCTATGGGACGCTACGGAAAAGAAGGAGAGTTGGATTCAACCGCTGTCTATCTTGCATCTGATGCATCT
TCCTATGTTACGGGCGCTGTTATTCCGGTAGACGGTGGGTATACATGCGTATAA

Protein sequence :
MQKRDLFSLKGRVAVVTGASSGLGVQMAKALAAQGADIVILARRKEKLEKVAEEIRQFGVRCLPIECDVTKIEMVRKAAE
LAEKEFGKVDILINNAGSGGIAPAEETSDEMWSNTINVDLSGVFMVAREFGKIMIKNKYGRIINISSIYGMVGNMAHPSA
AYHAAKGGVINLTRALAAEWAKYGITVNAICPGYFVTELTEDVLNTEYFTNYMKSTVPMGRYGKEGELDSTAVYLASDAS
SYVTGAVIPVDGGYTCV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 1e-27 41