Gene Information

Name : Cthe_1376 (Cthe_1376)
Accession : YP_001037801.1
Strain : Clostridium thermocellum ATCC 27405
Genome accession: NC_009012
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0460
EC number : 1.1.1.3
Position : 1679668 - 1680915 bp
Length : 1248 bp
Strand : -
Note : PFAM: homoserine dehydrogenase; homoserine dehydrogenase, NAD-binding; KEGG: mta:Moth_1307 homoserine dehydrogenase

DNA sequence :
ATGGTTAATATAGCAGTGATGGGATACGGAGTGGTCGGCTCCGGAGTTGTTGAAGTTATAAGAAAAAACAGTGTCAGCAT
ATCAAAGAAAGCGGGTCAGGAGATTCGCGTAAAAAAAATACTGGATATCAGGGATTTTCCGGACAGTCCTGAACGGGATT
TGTTTACAAAGAATCCTGATGAAATTTTTGATGACCCGTCAATAGGAATAGTTGTTGAGACCATAGGCGGAATAGGTGCT
GCGTACGAATTTACAAAGAAGGCTTTGAGCAAAGGAAAGAATGTTGTAACCTCGAACAAGGAGCTGGTTGCAACCCATGG
ACCTGAACTTTTGAAGCTTGCAAAGGAAAATGGAGTAAACTATCTGTTTGAAGCAAGTGTCGGCGGTGGAATTCCCATTA
TCAGGCCTTTGAACCGCTGCCTTGCCGCAAATGAAATACACAGCATCATAGGAATACTCAACGGAACTACGAACTACATA
TTAACACAGATGAAAAGGCAGGGAAAAGATTTTGACGAGGCTTTGAAAGAGGCACAGCAGAAAGGATATGCGGAAGCGGA
TCCAACCGCGGACATAGAAGGGCATGATGCATGCAGAAAAATTGCAATACTCTCATCCATTGCGTACAATGAATTTGTTG
ATTACAAAAAGATACATACGGAAGGCATAAAAAAAATAAGCCTTGCGGATATGAAATATGCCGAAAGCATGGATTCAACC
ATCAAGCTTGTCGCCATAAGCGAAAAAATCGGTGACGGTATTATGGCAAGGGTTGCTCCTGCGATAGTAAGCAGCAAAAG
TCCGCTTTACAGTGTTGAAGATGTTTTTAATGCTATTGTTGTGAGAGGAGATGCAATTGGAGAAGTGATGTTTTACGGCC
CGGGAGCGGGCAAGCTCCCCACGGCAAGCGCCGTTGTGGCGGATGTAATTGAAATTGTGAAGCATTGGGGTACCTGCGGC
AGCTATAACTGGGTTGTAAAAGACGGCGGCAACGTCATTGATTTGAAAGAAACCAGGACAAGGTATTTTGTGAGACTGAA
AGTGGAGAATGAAGCTGAAGCTAAAAAAGCGGTGGAGAATGCTTTTGGAAATGTTGAATGGGTAAAAGCGTATGATGCAA
GTGTACAGGATGAATTGGCATTTGTTACTTCCTGCGTTTTGGAGAAAGACTATTGCAATTCTCTTCAACAACTTAAAGGC
AGCAAAGCTGTAAAAGATGTGGTAAATGCCATAAGAGTCCTGGACTAA

Protein sequence :
MVNIAVMGYGVVGSGVVEVIRKNSVSISKKAGQEIRVKKILDIRDFPDSPERDLFTKNPDEIFDDPSIGIVVETIGGIGA
AYEFTKKALSKGKNVVTSNKELVATHGPELLKLAKENGVNYLFEASVGGGIPIIRPLNRCLAANEIHSIIGILNGTTNYI
LTQMKRQGKDFDEALKEAQQKGYAEADPTADIEGHDACRKIAILSSIAYNEFVDYKKIHTEGIKKISLADMKYAESMDST
IKLVAISEKIGDGIMARVAPAIVSSKSPLYSVEDVFNAIVVRGDAIGEVMFYGPGAGKLPTASAVVADVIEIVKHWGTCG
SYNWVVKDGGNVIDLKETRTRYFVRLKVENEAEAKKAVENAFGNVEWVKAYDASVQDELAFVTSCVLEKDYCNSLQQLKG
SKAVKDVVNAIRVLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 4e-47 42
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 4e-47 42