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Name : Cthe_1361 (Cthe_1361) Accession : YP_001037786.1 Strain : Clostridium thermocellum ATCC 27405 Genome accession: NC_009012 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 1653882 - 1654925 bp Length : 1044 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility-like; KEGG: bth:BT0380 nucleotide sugar epimerase DNA sequence : ATGTCAAAAATAGACTTAAGAAATAAGATTATATTTATTACAGGTGTTGCTGGTTTTATTGGAGCTTATTTTGCTAAGCA ATTACTTGATACAGTGGATGGTATTACAATTATAGGTATTGACAATATGAATGATTATTATGATGTTAAATTAAAAGAAA GTCGTTTAGAAAGTTTGTGTAATAATTCAAAATTCATTTTTGTGAAAGGAAACATTGCAGATAAAGAATTAATTAATAAT ATTTTTAATACATACCATCCACAGATTGTAGTTAATTTAGCTGCGCAGGCTGGAGTTAGATATAGCATTACTAACCCAGA TGCTTATATTGAATCGAATATAATAGGTTTTTACAATATACTTGAGGCCTGCCGTCATTCATATGACGAAGGTAAAGTTC CAGTTGAACACCTTGTTTATGCGAGCAGTTCATCTGTTTATGGTTCAAACAAGAAAGTACCATATTCTACTGAAGACAAA GTAGACTATCCTGTTTCACTGTATGCAGCAACAAAAAAGTCTAATGAGTTAATGGCTTATACATATAGTAAATTGTACAA TATACCATCGACAGGATTACGCTTCTTTACTGTTTATGGTCCTGCGGGACGACCGGATATGGCGTATTTTAGCTTTACAA ATAAGTTAGCACAAGGTAAAAAGATTCAGATTTTTAACTATGGTGACATGTACCGTGATTTTACATATATTGATGATATA GTTAAGGGTATTGTGCTTGTGCTCCAAAAGGTTCCTGAACCTATGGAAGATGGAGTAAGATACAAGATTTACAATATCGG AAATAACAAACCAGAAAATTTAATGCATTTCGTGGAAGTATTGGAGAAATGTCTGATGGAGGAAGGCATTATTACAAAGC CTGGTGAAAAAGAACTACTTCCTATGCAGCCTGGTGATGTATACCAAACATATGCTGATGTAGATGATTTAGTTCGAGAT TTTGGATTTAAGCCAAGCACAAGTCTTGAAGAAGGATTGAGTAAGTTTGCTAAGTGGTATCGTGAATTTTATATGCAGAA ATAA Protein sequence : MSKIDLRNKIIFITGVAGFIGAYFAKQLLDTVDGITIIGIDNMNDYYDVKLKESRLESLCNNSKFIFVKGNIADKELINN IFNTYHPQIVVNLAAQAGVRYSITNPDAYIESNIIGFYNILEACRHSYDEGKVPVEHLVYASSSSVYGSNKKVPYSTEDK VDYPVSLYAATKKSNELMAYTYSKLYNIPSTGLRFFTVYGPAGRPDMAYFSFTNKLAQGKKIQIFNYGDMYRDFTYIDDI VKGIVLVLQKVPEPMEDGVRYKIYNIGNNKPENLMHFVEVLEKCLMEEGIITKPGEKELLPMQPGDVYQTYADVDDLVRD FGFKPSTSLEEGLSKFAKWYREFYMQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-73 | 51 |
