Gene Information

Name : ssaB (SSA_0260)
Accession : YP_001034269.1
Strain : Streptococcus sanguinis SK36
Genome accession: NC_009009
Putative virulence/resistance : Virulence
Product : Mn/Zn ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 253746 - 254675 bp
Length : 930 bp
Strand : -
Note : GC: 42.37%; Transporter classification TC:3.A.1.15.2. Codon Adaptation Index (CAI): 0.786. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1); Curator(s): P. Manque , J. Alves

DNA sequence :
ATGAAAAAATTAGGTTTTTTATCCCTGCTTTTGCTAGCAGTCTGCACTCTCTTTGCCTGCTCCGGTCAGAAAAACGCATC
CAGTGACTCGTCCAAGCTCAAGGTTGTTGCGACCAACTCAATTATCGCTGATATTACCAAAAATATAGCTGGCGATAAGA
TTGATCTGCACAGCATTGTACCAGTCGGCAAAGATCCTCATGAATATGAGCCCCTGCCTGAAGATGTCAAAAAGACTTCT
CAAGCGGATCTCATCTTCTACAACGGTATCAATCTGGAAACTGGCGGTAATGCTTGGTTTACCAAGTTGGTCAAAAATGC
CAATAAGGAAGAAAACAAGGACTACTATGCTGTCAGCGATGGCGTTGACGTCATTTACCTTGAAGGGCAAAGTGAAAAGG
GTAAGGAAGACCCTCATGCTTGGCTCAATTTGGAAAACGGTATCATCTATGCGCAAAATATTGCCAAGCGTTTGATCGAA
AAAGACCCTGACAATAAGGCCACTTACGAGAAAAATCTCAAAGCTTATGTGGAAAAATTGACTGCTTTGGACAAGGAAGC
CAAGGAGAAATTCAACAATATTCCAGAGGAAAAGAAAATGATTGTGACCAGTGAAGGCTGCTTCAAGTACTTCTCTAAGG
CCTACAATGTGCCATCAGCCTACATCTGGGAAATCAACACCGAAGAAGAAGGAACTCCAGACCAAATCAAGAGCTTAGTT
GAAAAACTACGCGAGACCAAAGTGCCATCTCTCTTTGTCGAATCAAGTGTGGACGACCGTCCGATGAAGACTGTTTCTAA
AGACACTAACATCCCAATCCACGCTAAAATCTTCACAGACTCAATCGCTGAAAAGGGAGAAGAAGGAGACAGCTACTATA
GCATGATGAAATACAATCTGGATAAAATTTCTGAAGGATTGGCCAAATAA

Protein sequence :
MKKLGFLSLLLLAVCTLFACSGQKNASSDSSKLKVVATNSIIADITKNIAGDKIDLHSIVPVGKDPHEYEPLPEDVKKTS
QADLIFYNGINLETGGNAWFTKLVKNANKEENKDYYAVSDGVDVIYLEGQSEKGKEDPHAWLNLENGIIYAQNIAKRLIE
KDPDNKATYEKNLKAYVEKLTALDKEAKEKFNNIPEEKKMIVTSEGCFKYFSKAYNVPSAYIWEINTEEEGTPDQIKSLV
EKLRETKVPSLFVESSVDDRPMKTVSKDTNIPIHAKIFTDSIAEKGEEGDSYYSMMKYNLDKISEGLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 2e-112 79
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 3e-112 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaB YP_001034269.1 Mn/Zn ABC transporter substrate-binding protein VFG1359 Protein 3e-115 82
ssaB YP_001034269.1 Mn/Zn ABC transporter substrate-binding protein VFG2165 Protein 1e-84 57
ssaB YP_001034269.1 Mn/Zn ABC transporter substrate-binding protein VFG2157 Protein 2e-81 56