Gene Information

Name : SSA_2220 (SSA_2220)
Accession : YP_001036135.1
Strain : Streptococcus sanguinis SK36
Genome accession: NC_009009
Putative virulence/resistance : Virulence
Product : galactosyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 2220924 - 2221529 bp
Length : 606 bp
Strand : -
Note : GC: 41.42%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.8. SignalP prediction: Yes (prob. 0.989).

DNA sequence : 
ATGTATAAATTTTTTAAACGAACATTAGATATAGTCTTGTCATTCATAGGAATGATTGTCTTATCACCATTTTTTCTGCT
TCTAGTACTCGCTATTAAATTGGATTCAAAAGGACCAGTTTTGTTCAAACAGAAGCGGGTCGGCCTGCATAAAAAACACT
TCTATATTTTGAAATTCAGAACGATGCGAATTGACACCCCTAAAGATACCCCAACTCATTTACTGGAAAATCCTGAGCAA
TGGATTACAAAGGTTGGGAAGTTTCTTAGGAAGACGTCTCTGGATGAGTTGCCTCAGATTTGGAATATTTTTGTCGGTGA
CATGAGTATCATAGGTCCAAGACCGGCTCTTTGGAATCAGTATGATTTGATTGAAGAGCGAGACCGCTATGGAGCTAATG
ATGTTTTGCCAGGTCTGACAGGATGGGCTCAGATTCACGGGCGAGATGAGTTGCCGATTGGCAAGAAAGCTGAATTGGAC
GGCTACTACGTCCAGCATTTGTCTTTTGGATTGGATGTCCGCTGTTTCTTTGGCACTATTAAGAGTGTGGCCAAGAGCGA
AGGAGTTGTCGAAGGCGGCACGGGAAATATGGAAAAGAAAGATTAA

Protein sequence : 
MYKFFKRTLDIVLSFIGMIVLSPFFLLLVLAIKLDSKGPVLFKQKRVGLHKKHFYILKFRTMRIDTPKDTPTHLLENPEQ
WITKVGKFLRKTSLDELPQIWNIFVGDMSIIGPRPALWNQYDLIEERDRYGANDVLPGLTGWAQIHGRDELPIGKKAELD
GYYVQHLSFGLDVRCFFGTIKSVAKSEGVVEGGTGNMEKKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 7e-39 51
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 4e-40 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSA_2220 YP_001036135.1 galactosyltransferase VFG1369 Protein 4e-54 65
SSA_2220 YP_001036135.1 galactosyltransferase VFG1309 Protein 2e-39 49