|
Name : clpC (SSA_2199) Accession : YP_001036114.1 Strain : Streptococcus sanguinis SK36 Genome accession: NC_009009 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2198769 - 2201198 bp Length : 2430 bp Strand : - Note : GC: 50.16%; Codon Adaptation Index (CAI): 0.776. DNA sequence : ATGAAATACTCAAAAGCCTTAATAGAAAGCTTGGAAGCAGCCCAGCTCTTGGCCGGCCATTTTACGACAGATTATCTGGA ATCATGGCATCTGCTGATTGCTCTGGCTAATAATCCCTACAGCGTTGCTGGCTCAGTTCTCAATGAGTTTCCTGTGGAAG TTGATGGATTTGAAGAAGCGGCTTTTCAGATTACTGGTCAGGCTTATCAGAAAGACGGTCACTTCGAGCTGCTGCCTTTT TCTTATCGCTTAGAGGAGTTGTTTGAGGAGGCGGGCCAGGTTGCAGAAGCTGTTCGGGCTAAGCATGTAGGTACTGAACA TGTGCTGCTGGCTATGTTATTTGACCGGGGGACCTTGGCCTCTCGTATTCTGGAATTTACTGGCTTTAGCTACGAGGACA AGGAGCAGGGACCGAAAATCAGTGATTTGCGAAAGGTCTTGGAGCAGCGAGCTGGCTGGGGCAAGGAAGATATCAAGGCT ATTCGCAGTCTGAATAAGGGAGTAATGGCCGCTAAGCAGACCATGGCCAATATGATGGGTATGCCAGCTTCTACTAGCGG TGGTCTGGAAGACTACACCCGTGATCTGACGGAGCTGGCTAGAGATGGCCGATTGGAGCCCGTCATTGGCCGCGATCAAG AAATTTCACGGATAGTTCAGATTCTCAGTCGTAAGACTAAAAACAATCCAGTGCTGGTTGGAGATGCTGGGGTTGGTAAG ACAGCTCTGGCTTTAGGACTGGCTCAGCGTGTAGCGGCTGGTCAGGTTCCGGCTGAACTTGCTAAGATGCGGGTTTTGGA GCTGGACTTGATGAATGTAGTCGCTGGCACTCGCTTTCGCGGAGACTTCGAGGAGCGGATGAACAACATCATCAATGACA TTGAAGAAGATGGTCATGTCATTCTCTTCATCGATGAGCTTCATACTATCATGGGCTCTGGCAGCGGTATTGACTCGACC TTGGATGCGGCCAATATCCTGAAACCGGCTCTAGCTCGCGGAACTCTGCGGACAGTTGGCGCTACGACGCAGGAAGAGTA CCAGAAACATATTGAAAAAGATGCGGCCCTTTCCCGGCGTTTTGCCAAGGTCAGCATAGAAGAGCCAAATGTGGCTGACA GCATTGCTATTTTGCAAGGTCTGAGAAAGAGCTATGAGGACCATCACAAGGTACAGATTAGTGATCAGGCTATTGAGACG GCGGTGAAATACGCCCATCGCTATCTGACTAGCAAGCATCTGCCAGACTCTGCCATTGATCTTTTGGACGAGGCCAGTGC AACAGTGCAGAACAGAGGACCGCAAAATTACGAGCAGTCGGATTTGACGCCAGTAGATCAAGCCTTGATGGCAGCGGATT TTAAAAAGGTTTCACAACTGCTTGAGCAAGAGCAGCAACCTAAGCTCTATAAACTGAAAGTGGAAGAAGACGATGTTTTG GCTACTCTGAGTGGCTTGTCTGGTATTCCAGTGCAGAAGCTGACTCAGACAGATGCGAAGAAATACCTCAATTTGGAAAC AGAACTGCATAAACGCGTGATTGGGCAGGACGAGGCGATTTCAGCTATCAGCCGAGCTATCCGACGGAACCAGTCTGGTA TCCGCAGCAGCAAGCGGCCGATTGGCTCCTTTATGTTCCTAGGTCCGACAGGAGTCGGGAAGACAGAGCTAGCCAAGGCC TTGGCCGAAAGTCTCTTTGATGACGAGTCTGCTCTCATCCGCTTTGATATGAGTGAGTACATGGAGAAATTCGCGGCTAG CCGCCTCAATGGAGCGCCTCCAGGCTATGTAGGCTATGAAGAAGGGGGGGAGCTGACGGAAAAGGTGCGCAACAGACCTT ATTCTGTCCTGCTCTTTGACGAGGTGGAAAAGGCGCACCCGGATATTTTCAATGTTCTCCTGCAGGTCTTGGATGATGGT CAGTTGACTGATAGCAAGGGCCGCAAGGTGGACTTCTCCAACACGATTATTATCATGACCAGCAATCTGGGGGCAACTAG TTTGCGGGATGATAAGACGGTGGGCTTTGGAGCGCGGGATATTCGCTTGGACCATGCCAATATGGAAAAACGGATGCTGG AAGAGCTTAAGAAAGCATATAGACCGGAGTTTATCAACCGTATTGACGAGAAGGTAGTTTTCCACAGCTTATCTGCAGAA GATATGCAGGAAGTGGTCAAGGTTATGGTCAAACCGCTCATTGCCAGTCTCGCCGAGAAGGGAATTGAGCTGAAGTTTCA GACTAGTGCCCTTAAGCTACTGGCTCAGGAAGGCTACGATGTGGAAATGGGGGCACGGCCATTGCGCCGCACTCTGCAGA CCCAGGTAGAGGACAAACTATCTGAACTCCTCTTGACAGGAGATTTGATGACGGGTCAAACTCTTAAGGTCGGGGTCAAG GCTGGCCAACTCAAGTTCGAAGTGGCCTAG Protein sequence : MKYSKALIESLEAAQLLAGHFTTDYLESWHLLIALANNPYSVAGSVLNEFPVEVDGFEEAAFQITGQAYQKDGHFELLPF SYRLEELFEEAGQVAEAVRAKHVGTEHVLLAMLFDRGTLASRILEFTGFSYEDKEQGPKISDLRKVLEQRAGWGKEDIKA IRSLNKGVMAAKQTMANMMGMPASTSGGLEDYTRDLTELARDGRLEPVIGRDQEISRIVQILSRKTKNNPVLVGDAGVGK TALALGLAQRVAAGQVPAELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEEDGHVILFIDELHTIMGSGSGIDST LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVSIEEPNVADSIAILQGLRKSYEDHHKVQISDQAIET AVKYAHRYLTSKHLPDSAIDLLDEASATVQNRGPQNYEQSDLTPVDQALMAADFKKVSQLLEQEQQPKLYKLKVEEDDVL ATLSGLSGIPVQKLTQTDAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKA LAESLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG QLTDSKGRKVDFSNTIIIMTSNLGATSLRDDKTVGFGARDIRLDHANMEKRMLEELKKAYRPEFINRIDEKVVFHSLSAE DMQEVVKVMVKPLIASLAEKGIELKFQTSALKLLAQEGYDVEMGARPLRRTLQTQVEDKLSELLLTGDLMTGQTLKVGVK AGQLKFEVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-144 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001036114.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0079 | Protein | 5e-165 | 46 |
| clpC | YP_001036114.1 | ATP-dependent Clp protease, ATP-binding subunit | VFG0080 | Protein | 1e-126 | 45 |
