Gene Information

Name : clpL (SSA_2096)
Accession : YP_001036016.1
Strain : Streptococcus sanguinis SK36
Genome accession: NC_009009
Putative virulence/resistance : Virulence
Product : ATP-dependent protease, ATP-binding subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2099647 - 2101785 bp
Length : 2139 bp
Strand : -
Note : GC: 47.36%; Codon Adaptation Index (CAI): 0.799.

DNA sequence :
ATGAACAACAACTACAACAATTTTAACAATATGGACGACCTTTTCAACCAACTCATGGGGCGCATGGGTGGCTACAACAG
CGAACACCGGCGCTACTTGATTAATGGTAGAGAGGTCACACCGGAAGAGTTTGCTCAGTACCGGGCTACTGGCAAGCTCC
CTGGCCAAGGAACAAGTGAGCAGACTGGCCAAACTGCTGCTAATGCGCCTAAGCAAGATGGTATCCTAGCTAAGCTGGGT
CGTAATCTGACCCAAGAAGCGCGTGATGGAAAGTTAGATCCAGTCATTGGGCGTAATAAGGAAATCCAAGAAACAGCTGA
AATCCTTTCTCGCCGGACTAAGAACAATCCAGTTCTGGTCGGAGATGCAGGTGTCGGAAAGACCGCTGTAGTGGAAGGTT
TGGCTCAGGCTATCGTCAATGGTGATGTGCCAGCGGCTATCAAGAACAAAGAAATTATTTCTGTTGATATTTCTGGTCTG
GAAGCTGGTACCCAGTATCGTGGTAGCTTTGAAGAAAATATCCAAAACTTGGTCAATGAAGTCAAGGAAGCTGGCAATAT
CATCCTATTCTTTGATGAAATCCATCAAATCCTAGGAGCAGGATCTATCGGTGGAGATAGTGGCTCTAAGGGCATGGCGG
ATATTCTCAAACCAGCACTTTCTCGTGGAGAGTTGACCGTCATCGGGGCTACCACTCAGGACGAGTATCGTAACACCATT
CTCAAAAATGCAGCTCTGGCTCGCCGTTTCAATGAAGTCAAGGTCAATGCACCGTCTGCCGAAGACACCTATCAGATCCT
TCGAGGCATTCGGGACCTGTATGAAAAGCACCACAATGTCATCCTGCCGGATGAAGTGCTGAAAGCGGCTGTGGATTACT
CTGTTCAGTATATTCCACAACGGAGCCTGCCAGACAAGGCGATTGACCTGGTCGACGTGACTGCTGCCCACTTGGCAGCC
CAGCATCCAGTGACTAATGTTCATGCGGTTGAAAATGAGATTGCTGAACAGAAAGATAAGCAGGAAGCGGCTGTTGAGAA
AGAAGATTATGAAGCAGCTCTAAATGCCAAGACCCGCATTGAAGAGTTGGAAAAGAAAATTCAAAATCACACTGAGGATA
TGAAAGTGACTGCTACAGTCAACGACGTAGCAGAGTCTGTTGAGCGGATGACAGGTGTGCCGGTATCTCAAATGGGTGCC
AGCGACATTGAGCGCCTCAAGGGCATGAATGACCGTCTCAAAGCCAAGGTGATTGGCCAAGACAAGGCTGTAGAAGCTGT
GGCTAGGGCTATCCGCCGTAACCGTGCAGGCTTTGATGAAGGCAACCGTCCAATCGGAAGCTTCCTCTTTGTTGGTCCAA
CTGGCGTCGGAAAAACTGAGTTGGCTAAGCAACTGGCTTTGGATATGTTTGGTACCAAGGAAGCGATTATTCGTCTGGAT
ATGTCAGAATACTCCGACCGGACTGCTGTTTCCAAGCTGATTGGTACCACTGCAGGCTATGTCGGCTATGATGATAACAG
TAATACCCTGACCGAGCGTGTGCGCCGCAATCCTTACTCTATCATTCTCTTGGATGAGATTGAAAAGGCGGATCCACAAG
TGATTACCCTTCTCCTTCAAGTTCTGGATGACGGTCGTTTGACGGATGGTCAAGGGAATACAGTCAACTTCAAGAACACG
GTTATCATTGCGACTTCCAATGCTGGCTTTGGCTACGAAGCAGGCTTGGAAGAGGATGCTGAAAAGCCTGATTTGATGGA
TCGACTCAAAGCTTATTTCCGTCCAGAATTCCTCAATCGTTTCAATGCGGTTATTGAGTTCTCTCATCTCAAGAAAGAAG
ATTTGATGGAGATTGTTAATCTCATGCTGATCGAAGTAAATCAAACCTTGAGCAAGAAAGAAATTAATCTGGCTGTATCC
GATGCAGCAAAAGAATTCCTGCGTGACGCTGGTTATGACCAAGTCATGGGTGTTCGTCCGCTCCGCCGTGTCATTGAGCA
GCAAATCCGTGACAAGGTGACTGACTTCCACTTGGATAATCTAGATGCTAAGCACTTGACAGCCGATTTAGAAGATGGTG
TCTTAGTTATTCGTGAAAAGGGTGCTGACGCATCTGAAAAAGACAAGCAAGCAGAATAA

Protein sequence :
MNNNYNNFNNMDDLFNQLMGRMGGYNSEHRRYLINGREVTPEEFAQYRATGKLPGQGTSEQTGQTAANAPKQDGILAKLG
RNLTQEARDGKLDPVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISVDISGL
EAGTQYRGSFEENIQNLVNEVKEAGNIILFFDEIHQILGAGSIGGDSGSKGMADILKPALSRGELTVIGATTQDEYRNTI
LKNAALARRFNEVKVNAPSAEDTYQILRGIRDLYEKHHNVILPDEVLKAAVDYSVQYIPQRSLPDKAIDLVDVTAAHLAA
QHPVTNVHAVENEIAEQKDKQEAAVEKEDYEAALNAKTRIEELEKKIQNHTEDMKVTATVNDVAESVERMTGVPVSQMGA
SDIERLKGMNDRLKAKVIGQDKAVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKEAIIRLD
MSEYSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNT
VIIATSNAGFGYEAGLEEDAEKPDLMDRLKAYFRPEFLNRFNAVIEFSHLKKEDLMEIVNLMLIEVNQTLSKKEINLAVS
DAAKEFLRDAGYDQVMGVRPLRRVIEQQIRDKVTDFHLDNLDAKHLTADLEDGVLVIREKGADASEKDKQAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-140 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpL YP_001036016.1 ATP-dependent protease, ATP-binding subunit VFG0080 Protein 1e-152 49
clpL YP_001036016.1 ATP-dependent protease, ATP-binding subunit VFG0079 Protein 3e-142 45