Gene Information

Name : tnpR (llmg_0711)
Accession : YP_001032050.1
Strain : Lactococcus lactis MG1363
Genome accession: NC_009004
Putative virulence/resistance : Unknown
Product : DNA-invertase/resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 696901 - 697455 bp
Length : 555 bp
Strand : +
Note : High confidence in function and specificity

DNA sequence :
ATGAATATAGGATACGCACGAGTTTCAACTGGACTTCAAAATTTAGATTTACAAAAAGATAGTCTCAAAAAATATAACTG
TGAAAAAATATTTACTGACCATATGTCAGGAAGTAAAAGAGAAAGACCTGGATTAAAATCCGCCATCGAATTTTCTCGTC
CTGGGGATACGATTGTTGTTTGGCGATTGGATCGACTAGGTAGAAATATGGAAGATCTCATTAATATTGTTAATTCTCTT
AATAATAAAGGGGTAAGTTTTCATAGTCTACAAGAAAATATTACAATGGATAAATCAAGTTCGACTGGACAATTGATGTT
TCATTTGTTTGCGGCTTTTGCGGAATTTGAGCGAAATCTTATTTTGGAGCGTTCTGCCGCTGGTAGAGAAGCCGCACGTG
CAAGAGGACGACTTGGAGGAAGACCTGAGAAATTTTCGGAGCAAGACGTAAAGCTTCTTAAAACCTTGGTAGAAAGTGGT
ACGCCGATTAAGTCGATTGCGGATTCTTGGGGAGTTTCAAGAACCACAATTTATAGATATATTAATAAGTTTTAG

Protein sequence :
MNIGYARVSTGLQNLDLQKDSLKKYNCEKIFTDHMSGSKRERPGLKSAIEFSRPGDTIVVWRLDRLGRNMEDLINIVNSL
NNKGVSFHSLQENITMDKSSSTGQLMFHLFAAFAEFERNLILERSAAGREAARARGRLGGRPEKFSEQDVKLLKTLVESG
TPIKSIADSWGVSRTTIYRYINKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 5e-58 79
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 9e-59 79
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 9e-59 79
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 2e-32 52
res AGF34985.1 resolvase Not tested SGI1 Protein 2e-32 52
res AGF35025.1 resolvase Not tested SGI1 Protein 2e-32 52
res AGF35059.1 resolvase Not tested SGI1 Protein 2e-32 52
res AGK06929.1 resolvase Not tested SGI1 Protein 2e-32 52
res AGK06966.1 resolvase Not tested SGI1 Protein 2e-32 52
res AGK07012.1 resolvase Not tested SGI1 Protein 2e-32 52
res AGK07070.1 resolvase Not tested SGI1 Protein 2e-32 52
res AAK02044.1 resolvase Not tested SGI1 Protein 2e-32 52
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 1e-29 48
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 9e-25 41
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 9e-25 41
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 7e-25 41