Gene Information

Name : fhuC (llmg_0346)
Accession : YP_001031699.1
Strain : Lactococcus lactis MG1363
Genome accession: NC_009004
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter fhuC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 333550 - 334329 bp
Length : 780 bp
Strand : +
Note : High confidence in function and specificity

DNA sequence : 
ATGTATTTTGGTGCGAAAAATATCAATGTGTCTTATGGAAAAGAGCAGGTATTGAAAAACGTAACGCTGTCGATTGAAAA
AGGAAAAACGACAGCTATTATTGGAGTCAATGGTTCTGGAAAATCAACGATACTAAAAGCCCTAGGGCGCTTGATTAAAG
CAGAAGGTCAGGTTATTTTTGATAATCAGCCCTTAAGCAATCATTCAAATCGGGAGATTGCTCGCATTTTAGCCCTATTG
CCTCAATCAATTACTGCTCCCGCAGATATTACAGTCTATGAGCTTGTTAGCCTAGGACGTTTCCCACACCAAAAACTGAT
GCAACAACGTTTATCAAAAGAAGATATTACTTTTATTGAGGAATTAATGAGGGAAACAAATGTTTGGGATATTCGTGAAA
GTAAAGTATCAGAACTTTCTGGTGGGCAAAAACAAAGAGTATTTATCACAATGATTTTAGCCCAAGATAGTGAGATTATT
TTACTAGATGAACCCACAACGTATTTGGATTTAGCTCATCAGTTGGGTATTTTGTGTCTGCTTAAAGATTTAGCGACAAA
GCGAAATAAAACCATTGTTTACGTTATTCATGATTTGAACCATGCCGCTCGTTTTGCTGACAACCTAGTTCTCGTCAAAG
ATGGGGAAGTGGTCGAGCAAGGGACTGTTGATGACTTATTTACTCAAAAAACCTTGAAAGAATGCTTTGGATTGGACGTT
ACTTTAGGATGTGATACCTTTACCAAAAAATTAATGATTACTGGGGTGAAAGATGCCTAA

Protein sequence : 
MYFGAKNINVSYGKEQVLKNVTLSIEKGKTTAIIGVNGSGKSTILKALGRLIKAEGQVIFDNQPLSNHSNREIARILALL
PQSITAPADITVYELVSLGRFPHQKLMQQRLSKEDITFIEELMRETNVWDIRESKVSELSGGQKQRVFITMILAQDSEII
LLDEPTTYLDLAHQLGILCLLKDLATKRNKTIVYVIHDLNHAARFADNLVLVKDGEVVEQGTVDDLFTQKTLKECFGLDV
TLGCDTFTKKLMITGVKDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-47 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-41 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-41 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-41 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-41 44
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-42 43
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-42 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-42 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-45 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-45 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-45 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-45 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-45 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fhuC YP_001031699.1 ferrichrome ABC transporter fhuC BAC0164 Protein 1e-45 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fhuC YP_001031699.1 ferrichrome ABC transporter fhuC VFG0925 Protein 5e-43 43
fhuC YP_001031699.1 ferrichrome ABC transporter fhuC VFG1042 Protein 1e-45 42