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Name : copB (llmg_1694) Accession : YP_001032974.1 Strain : Lactococcus lactis MG1363 Genome accession: NC_009004 Putative virulence/resistance : Resistance Product : copper-potassium transporting ATPase B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 1668937 - 1670979 bp Length : 2043 bp Strand : + Note : High confidence in function and specificity DNA sequence : ATGAAAAATGAAACTCATTCAGACGCTCATGAAAAAATGATGAACGAGCCTCATCATGATCACGAAATGATGCAGATGGA AACTGATGGCCACGACATGGACATGATGAATCATGGTGGACACATGATGCACATGGGCGATATGAGTAAAAAGCTCAAAG TTTCTATCGTTCTAATGATTCCGCTTCTACTCATTTCACCAATTGCTGGATTTACAATCCTTAAATTCCCTGGTAGTGAA ATTCTCCAACTCATTCTCGGAACAATCATCTTCTTCTATTCTGGAACTCCTTTTTTCAGCGGGGCTAAAGGCGAACTAAA AAGTCATAAGCCAGCCATGATGATGCTGATTACAATGGGAATTACCGTTGCCTATGCTTACTCAGTCTATGCCACAATCA TGAGTCTTAATGGACAGATGGGAATGAACTTCTGGTTTGAACTTGCAACCTTAATTGTCATTATGCTGATTGGTCACCTC ATTGAAATGAAAGCAATCATGGGTGCCGGTGATGCATTAAAAGACTTAGCAAGTCTTGTTCCTAAAAAAGCTCACTTAAA AAATGGTGAAGATGTGGAACTTTCCGAATTAAAAGTTGGTGATTTACTTTTAGTAAAAGAAAATGAGAAAATACCTGCTG ACGGAATAATTTTAGGTGAAGCCCTTATTGATGAATCTATGATTACTGGCGAAAGTCGGGCGATTAGCAAAAAAATGAAT GCTTCTGTTTATGGTGGTTCACTGAACCAAAATCAACCTTTTGAAATGAAAGTCACAACACTTGGAAAGGATTCATTCCT TAATCAGGTTGCCGAACTAGTCAAAAAAGCTCAATCCCAAAAATCTAATCTTGAAAATATGGCAGATAAGGTGGCTGGAT ACCTCTTCTACGCTGCACTTATTGTCGGTATCTTTTCATTAATTTTTTGGACAATTAGTTCTAACTTTAGTTTTGCCTTA CTTCTTGCGGTTTCTGTTTTTGTGATTGCATGTCCACATGCTTTAGGCCTTGCGGTTCCACTTGTCGTTTCACGCTTAAC CAGTATTTCGGCTAAAAATGGCTTGCTTATTCAAAATAGAACTTCTTTAGAAAAAATCAATACGATTAAATATGCATTGA TGGATAAAACAGGCACATTAACTGATGGTAAATTTGTCGTCCGTAATGTTATTGATTTTACTGATGATACGGACATTCTA CAAATCATGGCAGCTCTTGAAGGAAGTTCTACTCATCCGATTGCTCAATCAATCGTTAATGCAGCTCAACCTCTGAAAAG TCTAAAAGTTGAAGCAATTGAAAATATCCCTGGGGTTGGGATTAAAGGTCAAGTCAATCAACACTTTTATCAAATCGTTA ATTATAAATATCTTCGCGAACATCAACTTTCTTATGATGAATCAAAAATTGCCCAATACTTAGAACTTGGGTTAACTGTA TCCTTCTTAATCAATGACCAACAAAAGGTTTTAGGGTTCATCGCTTTAGGAGATACTCCAAAAGCTGATGCCAAAGATTT TATAAACGGCCTGTTAGCTCAAGGAATCACACCCGTCATGTTAACAGGAGATAACAAGGAAACTGCTCAAAAAATTGCTA CCGCACTAAATATTCCTGAATTTAGAGCGGAATTAAAGCCTGAAGATAAAGCAGAGATTGTGAAAGAATATCAGAAGAAA GCAGGTGTTCTCTTCATTGGTGATGGTATCAATGATTCACCAGCACTTGCAACAGCTACGATTGGTTTTGCAATTGGCGC AGGTACTTCCGTTGCCATTAACACTGCTGATGTTGTTCTAGTTAACTCCAATCCAAGTGACGTCTTAGATATGATAAATA TCTCAAAAAGAATGCTTAAGAAAATGAAGCAAAACCTCTGGTTTGGGGCAGGTTATAATATTATTGCTATCCCTGTCGCA GCAGGTATCCTTTATCCATTTACGGGGATTTATATTGACCCTCTTATTGCAGCAGTTCTTATGTCAATCTCAACTGTGAT TGTTTCAATCAATGCGATGGGATTGAGGTATGATAAAAAATAG Protein sequence : MKNETHSDAHEKMMNEPHHDHEMMQMETDGHDMDMMNHGGHMMHMGDMSKKLKVSIVLMIPLLLISPIAGFTILKFPGSE ILQLILGTIIFFYSGTPFFSGAKGELKSHKPAMMMLITMGITVAYAYSVYATIMSLNGQMGMNFWFELATLIVIMLIGHL IEMKAIMGAGDALKDLASLVPKKAHLKNGEDVELSELKVGDLLLVKENEKIPADGIILGEALIDESMITGESRAISKKMN ASVYGGSLNQNQPFEMKVTTLGKDSFLNQVAELVKKAQSQKSNLENMADKVAGYLFYAALIVGIFSLIFWTISSNFSFAL LLAVSVFVIACPHALGLAVPLVVSRLTSISAKNGLLIQNRTSLEKINTIKYALMDKTGTLTDGKFVVRNVIDFTDDTDIL QIMAALEGSSTHPIAQSIVNAAQPLKSLKVEAIENIPGVGIKGQVNQHFYQIVNYKYLREHQLSYDESKIAQYLELGLTV SFLINDQQKVLGFIALGDTPKADAKDFINGLLAQGITPVMLTGDNKETAQKIATALNIPEFRAELKPEDKAEIVKEYQKK AGVLFIGDGINDSPALATATIGFAIGAGTSVAINTADVVLVNSNPSDVLDMINISKRMLKKMKQNLWFGAGYNIIAIPVA AGILYPFTGIYIDPLIAAVLMSISTVIVSINAMGLRYDKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0105 | YP_252020.1 | hypothetical protein | Not tested | SCCmec | Protein | 9e-103 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| copB | YP_001032974.1 | copper-potassium transporting ATPase B | BAC0079 | Protein | 5e-125 | 47 |
| copB | YP_001032974.1 | copper-potassium transporting ATPase B | BAC0383 | Protein | 3e-114 | 46 |
| copB | YP_001032974.1 | copper-potassium transporting ATPase B | BAC0629 | Protein | 6e-112 | 45 |
