Gene Information

Name : tnp904 (llmg_0122)
Accession : YP_001031484.1
Strain : Lactococcus lactis MG1363
Genome accession: NC_009004
Putative virulence/resistance : Unknown
Product : transposase for insertion sequence element IS904A
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 114793 - 115554 bp
Length : 762 bp
Strand : +
Note : Integrase, catalytic region; Conserved hypothetical protein

DNA sequence :
ATGCATCGTCGTCCTTCAAAACAACAAGTGGAGAGAGAAATTCTCTCAGAGAAGATAAAAGCTGTCTTTCATGAGCATAA
GGGACGCTATGGTGCGGTTAGAATTACCAAGGTACTTCATAATACTGGTATTATGACCAACACGAAACGTGTTGGGAAAC
TGATGCACTTGATGGGACTTTATGCCAAGGGAAGCCGTTATAAATATAAACATTACAACAGAAAAGGAGCTTCGCTTTCA
AGACCCAATTTAATTAATCAGATCTTTAAAGCAACAGCTCCTAATAAAGTATGGCTGGGAGACATGACCTATATCCCTAC
CAAAGAAGGCACCTTATACTTAGCCGTGAATATCGACGTTTTTTCACGTAAGATTGTAGGCTGGTCAATGTCTTCACGGA
TGCAAGATAAACTGGTGAGGGATTGCTTCTTACAAGCTTGTGGGAAAGAACATCCTCAGCCTGGCTTGATTGTCCATACT
GATCAAGGGAGTCAATATACAAGCTATCGTTATCAATCTACTCTTCGTCAAGTCGGTGCTCAATCTAGCATGAGTCGTAA
AGGAAATCCCTATGACAATGCATTGATGGAGTCTTTTTATAAGACGCTAAAGAGAGAGCTTATTAATGATGCTCATTTTG
AGACAAGAGCTGAGGCTACTCAAGAAATATTTAAATACATTGAGACCTATTACAATACAAAAAGGATGCATTCAGGTCTT
GATTACAAGTCTCCAAAAGACTTTGAAAAATATAATTCTTAA

Protein sequence :
MHRRPSKQQVEREILSEKIKAVFHEHKGRYGAVRITKVLHNTGIMTNTKRVGKLMHLMGLYAKGSRYKYKHYNRKGASLS
RPNLINQIFKATAPNKVWLGDMTYIPTKEGTLYLAVNIDVFSRKIVGWSMSSRMQDKLVRDCFLQACGKEHPQPGLIVHT
DQGSQYTSYRYQSTLRQVGAQSSMSRKGNPYDNALMESFYKTLKRELINDAHFETRAEATQEIFKYIETYYNTKRMHSGL
DYKSPKDFEKYNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-32 42
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-32 42
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 5e-32 42
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 5e-36 41
unnamed AAF09030.1 unknown Not tested SHI-O Protein 4e-36 41
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 5e-36 41
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 4e-36 41
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 4e-36 41
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 3e-36 41
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-36 41
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-35 41
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 4e-36 41
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-37 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-37 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-37 41
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnp904 YP_001031484.1 transposase for insertion sequence element IS904A VFG1706 Protein 2e-36 41
tnp904 YP_001031484.1 transposase for insertion sequence element IS904A VFG1631 Protein 1e-31 41