Gene Information

Name : Mlab_0677 (Mlab_0677)
Accession : YP_001030116.1
Strain : Methanocorpusculum labreanum Z
Genome accession: NC_008942
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 648060 - 648536 bp
Length : 477 bp
Strand : -
Note : -

DNA sequence :
ATGCAGATTCAGATCGTCTGCGTAGGAAAGATCAAAGACGCCTATATTTCATCCGGGGTTGTCGAGTTTGAAAAACGTCT
GCGGCCTTACGGGAAGATTTTCATCACGGAACTTGCCGAAGTGAAAATCCCGGATAACGCCTCGGCATCGGATGAACTCC
GCGTGAAGGAGAGAGAAGGAGAACTGATCCTGGCAAATGTCAAGGAGGGATTCTTTAAAATCGCTCTTGACCCGAACGGG
ATGTCTCTCTCGAGCGAAGAGTTTTCCGATGTATTTCGCGATGCGAAATTATCCGGAAAGAACCTCTGCTTCATCATCGG
CGGACCTCTTGGCCTGTCACCAAAATTGCTCCAATCGGTCGAAAAAAAACTGTCATTATCCCGTATGACCTTTACTCACC
CCATGACCAGGCTTATTCTCCTCGAACAGGTGTATCGCGCGTTTCGGATCCTGAACGGCGAACCCTACCACAAATAA

Protein sequence :
MQIQIVCVGKIKDAYISSGVVEFEKRLRPYGKIFITELAEVKIPDNASASDELRVKEREGELILANVKEGFFKIALDPNG
MSLSSEEFSDVFRDAKLSGKNLCFIIGGPLGLSPKLLQSVEKKLSLSRMTFTHPMTRLILLEQVYRAFRILNGEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 5e-30 45
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 3e-29 45
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 5e-30 45
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 5e-30 45
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 7e-30 45
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 5e-30 45
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 7e-30 45
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 5e-30 45
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 5e-30 45
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 5e-30 45
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 5e-30 45
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 5e-30 45
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 5e-30 45
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 2e-29 44
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 1e-28 44
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 7e-29 43
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 7e-29 43
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 2e-25 42